Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03681 and RBAM_023010

See DNA alignment / Visit BSNT_03681 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03681___comGE.1.9828.seq
#    -bsequence pep-align/RBAM_023010___comGE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03681___comGE-RBAM_023010___comGE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03681___comGE-RBAM_023010___comGE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03681___comGE
# 2: RBAM_023010___comGE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      51/116 (44.0%)
# Similarity:    76/116 (65.5%)
# Gaps:          13/116 (11.2%)
# Score: 264.0
# 
#
#=======================================

BSNT_03681___      1 MWRENKGFSTIETMSALSLWLFVLLTVVPLWDKLIADEKMAESREIGYQM     50
                     |...|||||||||:||:::|||::.:::|:|..::.|....|.|:..||:
RBAM_023010__      1 MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQL     50

BSNT_03681___     51 MNESISKYVMSGEGAASKTITKNNHIYAMKWEEEGEYQNVCIKATAYK-E     99
                     :.:.||.|:|:|:...|.         .:||:|:|||..||   ||.: |
RBAM_023010__     51 LQKHISTYMMTGKKPPSP---------GVKWKEDGEYYKVC---TADRSE     88

BSNT_03681___    100 KSYCLSILQTEWLYAS    115
                     |..|||||:|:|||||
RBAM_023010__     89 KEMCLSILKTDWLYAS    104


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