Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03678 and RBAM_022990

See DNA alignment / Visit BSNT_03678 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03678___comGG.1.9828.seq
#    -bsequence pep-align/RBAM_022990___comGG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03678___comGG-RBAM_022990___comGG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03678___comGG-RBAM_022990___comGG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03678___comGG
# 2: RBAM_022990___comGG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      65/125 (52.0%)
# Similarity:    95/125 (76.0%)
# Gaps:           1/125 ( 0.8%)
# Score: 354.0
# 
#
#=======================================

BSNT_03678___      1 MYRTRGFIYPAVLFVSALVLLIVNFAAAQYISRCMFEKETKELYIGENLL     50
                     ||::.||||||||||||.|||::::.::.:|:|..|.||..|.:||||||
RBAM_022990__      1 MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLL     50

BSNT_03678___     51 QNGVLLSIRHVLEERKGQEGTQQFPYGRVSYYIHDTSIKEQKEINLRVST    100
                     |||||||.||:.:.:|.|.|||:||||.||::|..:..:|..::.::..|
RBAM_022990__     51 QNGVLLSSRHMTQGQKVQTGTQRFPYGTVSFHITGSDRRETVQVTIQAET    100

BSNT_03678___    101 ESGTERTAQIVFDQKQKKLLRWTE-    124
                     .:||.|.|.::||||:|:|::||| 
RBAM_022990__    101 TTGTRREAHLLFDQKKKQLIQWTEV    125


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