Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03666 and RBAM_022900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence pep-align/BSNT_03666___yqhH.1.9828.seq
# -bsequence pep-align/RBAM_022900___yqhH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03666___yqhH-RBAM_022900___yqhH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03666___yqhH-RBAM_022900___yqhH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03666___yqhH
# 2: RBAM_022900___yqhH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 557
# Identity: 485/557 (87.1%)
# Similarity: 523/557 (93.9%)
# Gaps: 1/557 ( 0.2%)
# Score: 2550.0
#
#
#=======================================
BSNT_03666___ 1 MNTEMIYDAKWPEEFAERLKNDGPWANWELYKLSAEIQKTLAIPDFEGLR 50
|..|:|:||.||.||:||||.||||:|||:||||||:|:|||||:|||||
RBAM_022900__ 1 MTAEIIFDANWPGEFSERLKTDGPWSNWEMYKLSAEVQQTLAIPEFEGLR 50
BSNT_03666___ 51 APLYLPSFTPLPHQLEVAQKVVEKMNGKAILADEVGLGKTVEAGLILKEY 100
||||||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_022900__ 51 APLYLPNFTPLPHQLEVAQKVVEKMNGKAILADEVGLGKTVEAGLILKEY 100
BSNT_03666___ 101 MIRGLAKKILILVPASLVSQWVKELQEKFLIPAVEQKKSYVWEQCDIVVS 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022900__ 101 MIRGLAKKILILVPASLVSQWVKELQEKFLIPAVEQKKSYVWEQCDIVVS 150
BSNT_03666___ 151 SIDTAKRSPHREIVLSIPYDLVIIDEAHKLKNSKTKNYEFVRNLVKKYCL 200
||||||||||::||||||||||||||||||||||||||||.|:|||||||
RBAM_022900__ 151 SIDTAKRSPHKDIVLSIPYDLVIIDEAHKLKNSKTKNYEFARSLVKKYCL 200
BSNT_03666___ 201 LLTATPIQNRIEEIFNLVSLLKPGHLGSQNHFQEEFAKKKSSLEAHEHLK 250
|||||||||||||||||||||||||||:::.|||.| .:|..::||||||
RBAM_022900__ 201 LLTATPIQNRIEEIFNLVSLLKPGHLGNESGFQETF-NQKDGIDAHEHLK 249
BSNT_03666___ 251 DLVNKVMIRNRRHDTGLNWKQRHVETVPIEFSPSEQALYDEISRLKESIN 300
:|||||||||.|.||||.|.:||||||||.|||:||||||:|..||....
RBAM_022900__ 250 ELVNKVMIRNTRSDTGLTWTKRHVETVPITFSPTEQALYDDIVALKNGTE 299
BSNT_03666___ 301 KPASMFSIMTLQRECCSSREAVYMTLKKMLDQKEKQAPAIDEDTISVLID 350
||||.||||||||||||||||||||||||||||:|||||.|:.||:.|:|
RBAM_022900__ 300 KPASAFSIMTLQRECCSSREAVYMTLKKMLDQKDKQAPAFDDQTIANLMD 349
BSNT_03666___ 351 RINQVTQNSKALQVVDLIKKIDDKVIIFTEYRATQIYLQWFLQQNGISSV 400
|||||||||||:||||||:||:||||||||||||||||||||||||||||
RBAM_022900__ 350 RINQVTQNSKAIQVVDLIQKINDKVIIFTEYRATQIYLQWFLQQNGISSV 399
BSNT_03666___ 401 PFRGGFKRGKKDWMKDLFRGKIQVLIATEAGGEGINLQFCNHMINYDLPW 450
|||||||||||||||||||||:||||||||||||||||||||:|||||||
RBAM_022900__ 400 PFRGGFKRGKKDWMKDLFRGKVQVLIATEAGGEGINLQFCNHIINYDLPW 449
BSNT_03666___ 451 NPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKV 500
|||||||||||||||||||||||||||||||||||||||||:||||||.|
RBAM_022900__ 450 NPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILKLLYDKIHLFENV 499
BSNT_03666___ 501 VGELDDILTKIQVNNFEEHLHDILYHSATEEEMKIKMDNLTSFLSYKKQQ 550
|||||||||||:|:|||:||||||.||.|||||:||||||||||||..:.
RBAM_022900__ 500 VGELDDILTKIKVSNFEDHLHDILCHSLTEEEMRIKMDNLTSFLSYGTEN 549
BSNT_03666___ 551 PAEKRGS 557
||.|:||
RBAM_022900__ 550 PARKKGS 556
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