Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03662 and RBAM_022860

See DNA alignment / Visit BSNT_03662 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_03662___yqhL.1.9828.seq
#    -bsequence pep-align/RBAM_022860___yqhL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03662___yqhL-RBAM_022860___yqhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03662___yqhL-RBAM_022860___yqhL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03662___yqhL
# 2: RBAM_022860___yqhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:     113/126 (89.7%)
# Similarity:   119/126 (94.4%)
# Gaps:           0/126 ( 0.0%)
# Score: 594.0
# 
#
#=======================================

BSNT_03662___      1 MSNMIVLIIFAAFIIYMIASYVYQQRIMKTLTEEEFRAGYRKAQLIDVRE     50
                     |||||.|||.||||:|||.||.||||:|||||||||||||||||||||||
RBAM_022860__      1 MSNMIALIIVAAFIVYMIVSYFYQQRLMKTLTEEEFRAGYRKAQLIDVRE     50

BSNT_03662___     51 PNEFEGGHILGARNIPLSQLKQRKNEIRTDKPVYLYCQNSVRSGRAAQTL    100
                     ||||||||||||||||||||||||:|||.||||||||||:||||||||||
RBAM_022860__     51 PNEFEGGHILGARNIPLSQLKQRKSEIRPDKPVYLYCQNNVRSGRAAQTL    100

BSNT_03662___    101 RKNGCTEIYNLKGGFKKWGGKIKAKK    126
                     ||:||.:||||||||||||||||||.
RBAM_022860__    101 RKHGCKDIYNLKGGFKKWGGKIKAKN    126


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