Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03649 and RBAM_022770

See DNA alignment / Visit BSNT_03649 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_03649___yqhV.1.9828.seq
#    -bsequence pep-align/RBAM_022770___yqhV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03649___yqhV-RBAM_022770___yqhV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03649___yqhV-RBAM_022770___yqhV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03649___yqhV
# 2: RBAM_022770___yqhV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      84/93 (90.3%)
# Similarity:    91/93 (97.8%)
# Gaps:           0/93 ( 0.0%)
# Score: 409.0
# 
#
#=======================================

BSNT_03649___      1 MKFLLGNINSTVLTMAGLRVLSSMIELTAAIVMLVTNDVRKAVVVNSILA     50
                     ||||.|:||||||||||||||||:|||:|||:||:|||:|||||||||||
RBAM_022770__      1 MKFLFGSINSTVLTMAGLRVLSSLIELSAAIIMLLTNDIRKAVVVNSILA     50

BSNT_03649___     51 IVGPLIFIITMTVGIYQIAGQLSYAKLILIFTGVVLILAGVHK     93
                     ||||||||||||:||||||||||||||||||.|||||||||||
RBAM_022770__     51 IVGPLIFIITMTIGIYQIAGQLSYAKLILIFAGVVLILAGVHK     93


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.