Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03643 and RBAM_022720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence pep-align/BSNT_03643___spoIIIAE.1.9828.seq
# -bsequence pep-align/RBAM_022720___spoIIIAE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03643___spoIIIAE-RBAM_022720___spoIIIAE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03643___spoIIIAE-RBAM_022720___spoIIIAE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03643___spoIIIAE
# 2: RBAM_022720___spoIIIAE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 345/402 (85.8%)
# Similarity: 379/402 (94.3%)
# Gaps: 3/402 ( 0.7%)
# Score: 1700.0
#
#
#=======================================
BSNT_03643___ 1 MKRFQWVLLLAVLIIAGRAEIVQAAGN---AEQTEDHAETAEQLAERTAA 47
||||:|......:::..:.|.|||||. :::|..|.|:|:::|::.|.
RBAM_022720__ 1 MKRFRWAGAFLFILLFFQTECVQAAGTDGASQETAVHQESADEVAKKQAE 50
BSNT_03643___ 48 SLETDKIGEFWNDIMTEYGGLLPESQKGSLMEFINGDKSFSPQEWLKALF 97
:|:|:.||:||:|||||||||||||||||:::||||:|:|||:.||||||
RBAM_022720__ 51 ALKTEGIGKFWDDIMTEYGGLLPESQKGSIIDFINGEKTFSPEAWLKALF 100
BSNT_03643___ 98 SYLFHEVLANGKLLGTLILLTIFCVILQLLQNAFQQSTVSKVAYSIVYMV 147
||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_022720__ 101 SYLFHEVLANGKLLGTLILLTIFCVILQLLQNAFQQSTVSKVAYAIVYMV 150
BSNT_03643___ 148 LIILALNSFHVAINYATEAIQTMTSFILALIPLLLALLASSGGAVSAAFF 197
||||||||||||:|||:|||||||||||||||||||||||||||||||||
RBAM_022720__ 151 LIILALNSFHVAVNYASEAIQTMTSFILALIPLLLALLASSGGAVSAAFF 200
BSNT_03643___ 198 HPVILFLMNTSGLLIQNIVMPLIFLSAILSIVSTMTEQYKVTQLANLLRN 247
||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_022720__ 201 HPVILFLMNTSGLLIQNIVMPLIFLSAILSIVSTMTDQYKVTQLANLLRN 250
BSNT_03643___ 248 IAIGALAVFLTIFLGVISVQGASAAVTDGITLRTAKFITGNFIPVLGRMF 297
|||||||||||:||||||||||||||||||||||||||||||||||||||
RBAM_022720__ 251 IAIGALAVFLTVFLGVISVQGASAAVTDGITLRTAKFITGNFIPVLGRMF 300
BSNT_03643___ 298 TDATDTVISASLLLKNTVGILGVAILICIAAFPAIKVLSLAFIYKLAAAI 347
|||||||||||||||||||||||.|||||:||||||||||||||||||||
RBAM_022720__ 301 TDATDTVISASLLLKNTVGILGVGILICISAFPAIKVLSLAFIYKLAAAI 350
BSNT_03643___ 348 LQPLGGGPVITCLDVISKSVIYIFAALAIVSLMFFLSLTVIITAGNLTMM 397
|||||||||||||.|||:||:||||||||||||||||:||||||||||||
RBAM_022720__ 351 LQPLGGGPVITCLGVISRSVLYIFAALAIVSLMFFLSITVIITAGNLTMM 400
BSNT_03643___ 398 MK 399
||
RBAM_022720__ 401 MK 402
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