Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03616 and RBAM_022580

See DNA alignment / Visit BSNT_03616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_03616___ahrC.1.9828.seq
#    -bsequence pep-align/RBAM_022580___ahrC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03616___ahrC-RBAM_022580___ahrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03616___ahrC-RBAM_022580___ahrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03616___ahrC
# 2: RBAM_022580___ahrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     136/149 (91.3%)
# Similarity:   148/149 (99.3%)
# Gaps:           0/149 ( 0.0%)
# Score: 713.0
# 
#
#=======================================

BSNT_03616___      1 MNKGQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHL     50
                     |.||||||||||:|||:||||||:|||||:::||||||||||||||||||
RBAM_022580__      1 MTKGQRHIKIRELITSHEIETQDDLVDMLREEGYKVTQATVSRDIKELHL     50

BSNT_03616___     51 VKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIVLKTMP    100
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_022580__     51 VKVPTNNGSYKYSLPADQRFNPLSKLKRSLMDAFVKIDSASHMIVLKTMP    100

BSNT_03616___    101 GNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL    149
                     |||||||||||||:|:|:|||||||||||||||||||||||::||||||
RBAM_022580__    101 GNAQAIGALMDNLEWEEIMGTICGDDTILIICRTPEDTEGVQSRLLELL    149


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