Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03605 and RBAM_022520
See
DNA alignment /
Visit
BSNT_03605 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence pep-align/BSNT_03605___yqiG.1.9828.seq
# -bsequence pep-align/RBAM_022520___yqiG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03605___yqiG-RBAM_022520___yqiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03605___yqiG-RBAM_022520___yqiG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03605___yqiG
# 2: RBAM_022520___yqiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity: 285/382 (74.6%)
# Similarity: 330/382 (86.4%)
# Gaps: 9/382 ( 2.4%)
# Score: 1525.0
#
#
#=======================================
BSNT_03605___ 1 MRIQTKEDDQMNPKYKPLFEPFTFKSGVTIDNRIAVAPMTHYASNEDGTI 50
.|...||||||||||:|||||.|||:|||||||:||:||||
RBAM_022520__ 1 ---------MMKQTYKPLFEPFTFESGVTIPNRISVAPMTHYSSNDDGTI 41
BSNT_03605___ 51 SEAELDYIIPRSKEMGMVITACANVTPDGKAFPGQPAIHDDSNIPGLKKL 100
|:.||.||.|||||||||||||||||||||||||||.|:|||:|||||||
RBAM_022520__ 42 SDRELSYITPRSKEMGMVITACANVTPDGKAFPGQPGIYDDSHIPGLKKL 91
BSNT_03605___ 101 AQAIQAQGAKAVVQIHHGGIECPSELVPQQDVVGPSDVFDNGKQIARALK 150
|||||:|||||||||||||:|||.||||..|||.||...::|:|.:|||.
RBAM_022520__ 92 AQAIQSQGAKAVVQIHHGGLECPPELVPNNDVVSPSGSEEDGRQTSRALT 141
BSNT_03605___ 151 EEEVENIVKAFGEATRRAIEAGFDGVEIHGANGYLIQQFYSPKTNQRTDR 200
|:|:|:||||||||||||||||||||||||||||||.||||||||:||||
RBAM_022520__ 142 EQEIEHIVKAFGEATRRAIEAGFDGVEIHGANGYLIHQFYSPKTNRRTDR 191
BSNT_03605___ 201 WGGSDEKRLAFPLAIVDEVKKAASEHAKGAFLVGYRLSPEEPETPGLTMT 250
||||||||||||||:||.||:|...||:..|::||||||||||||||||.
RBAM_022520__ 192 WGGSDEKRLAFPLAVVDAVKQAIDTHAENPFVLGYRLSPEEPETPGLTMK 241
BSNT_03605___ 251 ETYTLVDALGDKELDYLHISLMDVNSKARRGADPTRTRMDLLNERVGNKV 300
||:.|.|||.::.||||||||||||||||||||.:||||||||||||:||
RBAM_022520__ 242 ETFMLADALAEENLDYLHISLMDVNSKARRGADSSRTRMDLLNERVGHKV 291
BSNT_03605___ 301 PLIAVGSIHSADDALAVIENGIPLVAMGREILVDPDWTVKVKEGREKQIE 350
||:|||||::||:||||:|:||||||:||.||::|:|.|.||||||::||
RBAM_022520__ 292 PLMAVGSIYTADEALAVLESGIPLVALGRVILINPEWAVLVKEGREQEIE 341
BSNT_03605___ 351 TVIKGTDKEKYHLPEPLWQAIVNTPGWVPYKD 382
..|:.::.|||.||||||:.|.||.||||::.
RBAM_022520__ 342 KAIQASEIEKYRLPEPLWEMIQNTGGWVPFEK 373
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.