Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03601 and RBAM_022470
See
DNA alignment /
Visit
BSNT_03601 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_03601___yqiI.1.9828.seq
# -bsequence pep-align/RBAM_022470___yqiI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03601___yqiI-RBAM_022470___yqiI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03601___yqiI-RBAM_022470___yqiI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03601___yqiI
# 2: RBAM_022470___yqiI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 142/208 (68.3%)
# Similarity: 164/208 (78.8%)
# Gaps: 9/208 ( 4.3%)
# Score: 697.0
#
#
#=======================================
BSNT_03601___ 1 -------MALCGLA-LTLAPCAQAAEPIEGKTVYIDAGHGGEDSGAVGNG 42
.|..|.| |.|||.|.||||::|||:|||||||||||||.|||
RBAM_022470__ 1 MGLLTKSAAAFGAALLLLAPSAYAAEPLQGKTIYIDAGHGGEDSGASGNG 50
BSNT_03601___ 43 LFEKDINLAVSEHVTDKLKEEGANPVASRSDDHFLTLEERVAKASANQAD 92
|.||:||||||..|..||:.|||.|||||:||.||.|:||||||||:|:|
RBAM_022470__ 51 LLEKNINLAVSNKVIAKLETEGAKPVASRTDDTFLRLDERVAKASASQSD 100
BSNT_03601___ 93 LFVSIHVNSGVASASGTETYFQSDYEGENSRRLASDIQSQLVSSLQTRDR 142
||||:|.||.|::||||||||.|.|||.:|.|||||||.|||:||..:||
RBAM_022470__ 101 LFVSLHTNSAVSTASGTETYFNSTYEGADSERLASDIQQQLVTSLGMKDR 150
BSNT_03601___ 143 GVKESDFYVITYSQMPSVLAELGFITNSSDADKLGSEEYQQKAADAIVNG 192
||||:.|||||||:|||||||||||||..|||||.|:..|:.||||:|||
RBAM_022470__ 151 GVKEAPFYVITYSKMPSVLAELGFITNPQDADKLKSDNGQEHAADAVVNG 200
BSNT_03601___ 193 IDSYYDQ- 199
|::||..
RBAM_022470__ 201 IETYYSGR 208
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.