Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03578 and RBAM_022310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence pep-align/BSNT_03578___bkdB.1.9828.seq
# -bsequence pep-align/RBAM_022310___bkdB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03578___bkdB-RBAM_022310___bkdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03578___bkdB-RBAM_022310___bkdB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03578___bkdB
# 2: RBAM_022310___bkdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 427
# Identity: 339/427 (79.4%)
# Similarity: 374/427 (87.6%)
# Gaps: 10/427 ( 2.3%)
# Score: 1693.0
#
#
#=======================================
BSNT_03578___ 1 MAIEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVP 50
||||||.||||||||||||||||||:|||:||||||||||||||||||||
RBAM_022310__ 1 MAIEQMAMPQLGESVTEGTISKWLVSPGDQVNKYDPIAEVMTDKVNAEVP 50
BSNT_03578___ 51 SSFTGTITELVGEEGQTLQVGEVICKIETEGANPAEQKQEQPAASKAAET 100
|||||||.||||||||||.|||:|||||||.....|..:.:...:..::|
RBAM_022310__ 51 SSFTGTIRELVGEEGQTLAVGEIICKIETEETETEEAPKREEEQNSPSDT 100
BSNT_03578___ 101 PAAKSAEAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQ 150
.| :.:..||.||.|||||||||||||||.|::|.||||||||||||||
RBAM_022310__ 101 DA--NRQGKDQSNKARYSPAVLRLAGEHGIQLEEVEGTGAGGRITRKDIQ 148
BSNT_03578___ 151 RLIETGGVQEQKAEEPKTAAPAPKSASKPEPK---EETSYPASAAGDKEI 197
::|::| .:||:|.| |||....::..|| |:...||.:|||.||
RBAM_022310__ 149 KIIDSG--MKQKSEAP---APAAVQTTQQAPKQQQEQAPAPALSAGDIEI 193
BSNT_03578___ 198 PVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYRNSIKDSFKKTEG 247
||||||||||:||.:|||||||||||||||||||.|||||||||||:.||
RBAM_022310__ 194 PVTGVRKAIAANMHKSKTEIPHAWTMMEVDVTNMTAYRNSIKDSFKQKEG 243
BSNT_03578___ 248 FNLTFFAFFVKAVAQALKEFPQMNSMWAGDKIIQKKDINISIAVATEDSL 297
||||||||||||.|||||||||||||||||||:|||||||||||||||||
RBAM_022310__ 244 FNLTFFAFFVKAAAQALKEFPQMNSMWAGDKIVQKKDINISIAVATEDSL 293
BSNT_03578___ 298 FVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNTGSF 347
||||||:||||||||||::||.||||||:|||||:|||||||||||||||
RBAM_022310__ 294 FVPVIKHADEKTIKGIAREITDLAKKVRNGKLTAEDMQGGTFTVNNTGSF 343
BSNT_03578___ 348 GSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLCLSLDHRV 397
||||||||||:||||||||||||||||||:||||||||||||||||||||
RBAM_022310__ 344 GSVQSMGIINHPQAAILQVESIVKRPVVMNNGMIAVRDMVNLCLSLDHRV 393
BSNT_03578___ 398 LDGLVCGRFLGRVKQILESIDEKTSVY 424
||||||||||||||:|||:|||.||||
RBAM_022310__ 394 LDGLVCGRFLGRVKEILENIDEHTSVY 420
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