Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03578 and RBAM_022310

See DNA alignment / Visit BSNT_03578 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_03578___bkdB.1.9828.seq
#    -bsequence pep-align/RBAM_022310___bkdB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03578___bkdB-RBAM_022310___bkdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03578___bkdB-RBAM_022310___bkdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03578___bkdB
# 2: RBAM_022310___bkdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 427
# Identity:     339/427 (79.4%)
# Similarity:   374/427 (87.6%)
# Gaps:          10/427 ( 2.3%)
# Score: 1693.0
# 
#
#=======================================

BSNT_03578___      1 MAIEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVP     50
                     ||||||.||||||||||||||||||:|||:||||||||||||||||||||
RBAM_022310__      1 MAIEQMAMPQLGESVTEGTISKWLVSPGDQVNKYDPIAEVMTDKVNAEVP     50

BSNT_03578___     51 SSFTGTITELVGEEGQTLQVGEVICKIETEGANPAEQKQEQPAASKAAET    100
                     |||||||.||||||||||.|||:|||||||.....|..:.:...:..::|
RBAM_022310__     51 SSFTGTIRELVGEEGQTLAVGEIICKIETEETETEEAPKREEEQNSPSDT    100

BSNT_03578___    101 PAAKSAEAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQ    150
                     .|  :.:..||.||.|||||||||||||||.|::|.||||||||||||||
RBAM_022310__    101 DA--NRQGKDQSNKARYSPAVLRLAGEHGIQLEEVEGTGAGGRITRKDIQ    148

BSNT_03578___    151 RLIETGGVQEQKAEEPKTAAPAPKSASKPEPK---EETSYPASAAGDKEI    197
                     ::|::|  .:||:|.|   |||....::..||   |:...||.:|||.||
RBAM_022310__    149 KIIDSG--MKQKSEAP---APAAVQTTQQAPKQQQEQAPAPALSAGDIEI    193

BSNT_03578___    198 PVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYRNSIKDSFKKTEG    247
                     ||||||||||:||.:|||||||||||||||||||.|||||||||||:.||
RBAM_022310__    194 PVTGVRKAIAANMHKSKTEIPHAWTMMEVDVTNMTAYRNSIKDSFKQKEG    243

BSNT_03578___    248 FNLTFFAFFVKAVAQALKEFPQMNSMWAGDKIIQKKDINISIAVATEDSL    297
                     ||||||||||||.|||||||||||||||||||:|||||||||||||||||
RBAM_022310__    244 FNLTFFAFFVKAAAQALKEFPQMNSMWAGDKIVQKKDINISIAVATEDSL    293

BSNT_03578___    298 FVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNTGSF    347
                     ||||||:||||||||||::||.||||||:|||||:|||||||||||||||
RBAM_022310__    294 FVPVIKHADEKTIKGIAREITDLAKKVRNGKLTAEDMQGGTFTVNNTGSF    343

BSNT_03578___    348 GSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLCLSLDHRV    397
                     ||||||||||:||||||||||||||||||:||||||||||||||||||||
RBAM_022310__    344 GSVQSMGIINHPQAAILQVESIVKRPVVMNNGMIAVRDMVNLCLSLDHRV    393

BSNT_03578___    398 LDGLVCGRFLGRVKQILESIDEKTSVY    424
                     ||||||||||||||:|||:|||.||||
RBAM_022310__    394 LDGLVCGRFLGRVKEILENIDEHTSVY    420


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