Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03552 and RBAM_022190

See DNA alignment / Visit BSNT_03552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_03552___yqzJ.1.9828.seq
#    -bsequence pep-align/RBAM_022190___yqzJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03552___yqzJ-RBAM_022190___yqzJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03552___yqzJ-RBAM_022190___yqzJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03552___yqzJ
# 2: RBAM_022190___yqzJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 98
# Identity:      73/98 (74.5%)
# Similarity:    79/98 (80.6%)
# Gaps:           5/98 ( 5.1%)
# Score: 380.0
# 
#
#=======================================

BSNT_03552___      1 MDVMTMFVESINDVLFLVDFFTIILPALTAIGIAFLLRECRVGEQWKSKR     50
                          |.:||:||.|||||||||||||||||||||||||.|.||.|::||
RBAM_022190__      1 -----MILESMNDFLFLVDFFTIILPALTAIGIAFLLRERRAGEHWRTKR     45

BSNT_03552___     51 TDEHQTVFHINRTDFLIIIYHRITTWIRKVFRMNSPVNDEEDAGSLLL     98
                     .||||.|..:||||||||||||||||||||.|||||.||:||...|||
RBAM_022190__     46 IDEHQAVVQLNRTDFLIIIYHRITTWIRKVIRMNSPANDDEDVSFLLL     93


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