Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03539 and RBAM_021930
See
DNA alignment /
Visit
BSNT_03539 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence pep-align/BSNT_03539___proI.1.9828.seq
# -bsequence pep-align/RBAM_021930___proI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03539___proI-RBAM_021930___proI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03539___proI-RBAM_021930___proI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03539___proI
# 2: RBAM_021930___proI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity: 213/279 (76.3%)
# Similarity: 248/279 (88.9%)
# Gaps: 1/279 ( 0.4%)
# Score: 1093.0
#
#
#=======================================
BSNT_03539___ 1 MKKIGFVGAGSMAEAMINGILQSGITKPEHIYITNRSNDERLIELKETYG 50
||||||:|||||||||:||:||||:|.|.|||:||||||.||.||::|||
RBAM_021930__ 1 MKKIGFIGAGSMAEAMVNGLLQSGMTAPGHIYMTNRSNDSRLEELQKTYG 50
BSNT_03539___ 51 VRPCRDKNEFFTHTDIIILAFKPKDAAESIDSIRPYIKDQLVISVLAGLT 100
|:|||||.|||::||||:||||||||||||::||.|:||||||||:||||
RBAM_021930__ 51 VKPCRDKEEFFSNTDIIVLAFKPKDAAESIENIREYVKDQLVISVIAGLT 100
BSNT_03539___ 101 IETIQHYFGRKLAVIRVMPNTSAAIRKSATGFSVSTEASKNDIIAAKALL 150
|.|||.||||||.:||.||||||||::||||||.|:|||:.:|..||.||
RBAM_021930__ 101 IHTIQQYFGRKLTIIRAMPNTSAAIQQSATGFSASSEASEAEIRTAKELL 150
BSNT_03539___ 151 ETIGDATLVEERHLDAVTAIAGSGPAYVYRYIEAMEKAAQKVGLDKETAK 200
||||:||..||:|||||||||||||||||||:|||||||.:.||.:||||
RBAM_021930__ 151 ETIGEATRFEEKHLDAVTAIAGSGPAYVYRYVEAMEKAALQAGLPEETAK 200
BSNT_03539___ 201 ALILQTMAGATDMLLQSGKQPEKLRKEITSPGGTTEAGLRALQDSRFEEA 250
.||||||||||:||..|.|:||:|||||||||||||||||||::.|||||
RBAM_021930__ 201 ELILQTMAGATEMLRTSSKRPERLRKEITSPGGTTEAGLRALEERRFEEA 250
BSNT_03539___ 251 IIHCIEETAKRSAEIKEQFAGAALERHS- 278
|:|||.|||.|||||||||||:.|::..
RBAM_021930__ 251 IMHCIAETAARSAEIKEQFAGSVLQKTDQ 279
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.