Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03523 and RBAM_021810

See DNA alignment / Visit BSNT_03523 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03523___yqjZ.1.9828.seq
#    -bsequence pep-align/RBAM_021810___yqjZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03523___yqjZ-RBAM_021810___yqjZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03523___yqjZ-RBAM_021810___yqjZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03523___yqjZ
# 2: RBAM_021810___yqjZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      74/114 (64.9%)
# Similarity:    89/114 (78.1%)
# Gaps:           1/114 ( 0.9%)
# Score: 400.0
# 
#
#=======================================

BSNT_03523___      1 MDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVES     50
                     |.||:.||:||||||||||:|.:.|..|..|||||::||..||||||.||
RBAM_021810__      1 MGFLADTPKPPYYAVIFSSIKGKYDEEYEHTAERMMNLAGGQPGFLGAES     50

BSNT_03523___     51 VREADGRGITVSYWDSMDAINHWKHHTEHQAAKEKGKSVWYESYAVRVAK    100
                     |||.:|.|||||||||::||..||.||:|||||:||||.|||:||||:.|
RBAM_021810__     51 VREENGCGITVSYWDSLEAIKRWKDHTDHQAAKQKGKSAWYEAYAVRITK    100

BSNT_03523___    101 IERQRLF-QENTND    113
                     .|.||:| .:...|
RBAM_021810__    101 TESQRMFASKGAED    114


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