Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03430 and RBAM_021200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence pep-align/BSNT_03430___ypaA.1.9828.seq
# -bsequence pep-align/RBAM_021200___ypaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03430___ypaA-RBAM_021200___ypaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03430___ypaA-RBAM_021200___ypaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03430___ypaA
# 2: RBAM_021200___ypaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 164/190 (86.3%)
# Similarity: 179/190 (94.2%)
# Gaps: 0/190 ( 0.0%)
# Score: 845.0
#
#
#=======================================
BSNT_03430___ 1 MKVKKLVVVSMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILIYG 50
||||||||:||||||||||||||||||||||||||||||||||||||:||
RBAM_021200__ 1 MKVKKLVVISMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILVYG 50
BSNT_03430___ 51 PLAGIAVEAIKNVPQYIIQGSMAGVPVGQVANFIAGTLFILPTAFLFKKL 100
|.||:|||||||:.|||||||||||||||.|||||||||||||||:||||
RBAM_021200__ 51 PAAGVAVEAIKNILQYIIQGSMAGVPVGQAANFIAGTLFILPTAFMFKKL 100
BSNT_03430___ 101 NSAKGLAVSLLLGTAAMTILMSILNYVLILPAYTWFLHSPALSDSALKTA 150
|||||||||||.||||||:|||||||:||||||||||||||||:|.||||
RBAM_021200__ 101 NSAKGLAVSLLAGTAAMTVLMSILNYILILPAYTWFLHSPALSNSQLKTA 150
BSNT_03430___ 151 VVAGILPFNMIKGIVITVVFSLIFIKLKPWIEQQRSAHIH 190
|||||||||::||::||:||:.||.||||||||:||....
RBAM_021200__ 151 VVAGILPFNIVKGVIITIVFTFIFTKLKPWIEQKRSIQTQ 190
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