Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03418 and RBAM_021110

See DNA alignment / Visit BSNT_03418 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_03418___gudB.1.9828.seq
#    -bsequence pep-align/RBAM_021110___gudB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03418___gudB-RBAM_021110___gudB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03418___gudB-RBAM_021110___gudB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03418___gudB
# 2: RBAM_021110___gudB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 424
# Identity:     403/424 (95.0%)
# Similarity:   414/424 (97.6%)
# Gaps:           0/424 ( 0.0%)
# Score: 2099.0
# 
#
#=======================================

BSNT_03418___      1 MAADRNTGHTEEDKLDVLKSTQTVIHKALEKLGYPEEVYELLKEPMRLLT     50
                     |||||.|||.||||.||||||||||||||||||||||||||||||:||||
RBAM_021110__      1 MAADRFTGHNEEDKHDVLKSTQTVIHKALEKLGYPEEVYELLKEPLRLLT     50

BSNT_03418___     51 VKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGGIRFHPNVTEKEVKALSIW    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021110__     51 VKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGGIRFHPNVTEKEVKALSIW    100

BSNT_03418___    101 MSLKCGIIDLPYGGGKGGIVCDPRDMSFRELERLSRGYVRAISQIVGPTK    150
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_021110__    101 MSLKCGIIDLPYGGGKGGIVCDPRNMSFRELERLSRGYVRAISQIVGPTK    150

BSNT_03418___    151 DVPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGKPLVLGGSHGRESAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021110__    151 DVPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGKPLVLGGSHGRESAT    200

BSNT_03418___    201 AKGVTICIKEAAKKRGIDIKGARVVVQGFGNAGSYLAKFMHDAGAKVVGI    250
                     ||||||||||||||:|:||:.|||||||||||||||||||||||||||||
RBAM_021110__    201 AKGVTICIKEAAKKKGLDIQNARVVVQGFGNAGSYLAKFMHDAGAKVVGI    250

BSNT_03418___    251 SDAYGGLYDPEGLDIDYLLDRRDSFGTVTKLFNDTITNQELLELDCDILV    300
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_021110__    251 SDAYGGLYDPDGLDIDYLLDRRDSFGTVTKLFNDTITNQELLELDCDILV    300

BSNT_03418___    301 PAAIENQITEENAHNIRAKIVVEAANGPTTLEGTKILSDRDILLVPDVLA    350
                     |||||||||||||..|:||||||||||||||||||||:|:..||||||||
RBAM_021110__    301 PAAIENQITEENADRIKAKIVVEAANGPTTLEGTKILTDKGTLLVPDVLA    350

BSNT_03418___    351 SAGGVTVSYFEWVQNNQGFYWSEEEVEEKLEKMMVKSFNNIYEMANNRRI    400
                     |||||||||||||||||||||||||||||||.||:|||||||||:.||||
RBAM_021110__    351 SAGGVTVSYFEWVQNNQGFYWSEEEVEEKLENMMIKSFNNIYEMSQNRRI    400

BSNT_03418___    401 DMRLAAYMVGVRKMAEASRFRGWI    424
                     ||||||||||||||||||||||||
RBAM_021110__    401 DMRLAAYMVGVRKMAEASRFRGWI    424


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