Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03404 and RBAM_021030

See DNA alignment / Visit BSNT_03404 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_03404___rpsA.1.9828.seq
#    -bsequence pep-align/RBAM_021030___rpsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03404___rpsA-RBAM_021030___rpsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03404___rpsA-RBAM_021030___rpsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03404___rpsA
# 2: RBAM_021030___rpsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity:     362/382 (94.8%)
# Similarity:   373/382 (97.6%)
# Gaps:           0/382 ( 0.0%)
# Score: 1820.0
# 
#
#=======================================

BSNT_03404___      1 MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELS     50
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_021030__      1 MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIVNVKQSGIIPISELS     50

BSNT_03404___     51 SLHVEKASDVVKVDDELDLKVTKVEDDALILSKRAVDADRAWEDLEKKFE    100
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_021030__     51 SLHVEKASDVVKVDDELDLKVTKVEDDALILSKRAVDADRAWEDLEKKFD    100

BSNT_03404___    101 TKEVFEAEVKDVVKGGLVVDIGVRGFIPASLVEAHFVEDFTDYKGKTLSL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021030__    101 TKEVFEAEVKDVVKGGLVVDIGVRGFIPASLVEAHFVEDFTDYKGKTLSL    150

BSNT_03404___    151 LVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTD    200
                     :||||||||||||||||||||.||..||.:.||:|||||||:||||||||
RBAM_021030__    151 IVVELDRDKNRVILSHRAVVEKEQTAKKHDFLQTLEVGSVLEGKVQRLTD    200

BSNT_03404___    201 FGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNER    250
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_021030__    201 FGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQDVKVKVLSVDRDNER    250

BSNT_03404___    251 ISLSIKDTLPGPWSQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLV    300
                     ||||||:||||||||:|||||.||||||.|||||||||||||||||||||
RBAM_021030__    251 ISLSIKETLPGPWSQVGEKVKQGDVLEGKVQRLVSFGAFVEILPGVEGLV    300

BSNT_03404___    301 HISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKA    350
                     ||||||||||||||||||||||||||||||||:|||||||||||||.|||
RBAM_021030__    301 HISQISNKHIGTPHEVLEEGQTVKVKVLDVNESEERISLSMRELEEAPKA    350

BSNT_03404___    351 DQEDYRQYQAKEETSTGFQLGDLIGDKLNKLK    382
                     ||||:||||||||.||||||||||||||||||
RBAM_021030__    351 DQEDFRQYQAKEEPSTGFQLGDLIGDKLNKLK    382


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