Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03384 and RBAM_020930

See DNA alignment / Visit BSNT_03384 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_03384___mtrB.1.9828.seq
#    -bsequence pep-align/RBAM_020930___mtrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03384___mtrB-RBAM_020930___mtrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03384___mtrB-RBAM_020930___mtrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03384___mtrB
# 2: RBAM_020930___mtrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 75
# Identity:      72/75 (96.0%)
# Similarity:    72/75 (96.0%)
# Gaps:           0/75 ( 0.0%)
# Score: 363.0
# 
#
#=======================================

BSNT_03384___      1 MNQKHSSDFVVIKAVEDGVNVIGLTRGTDTKFHHSEKLDKGEVIIAQFTE     50
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020930__      1 MNSKHSSDFVVIKAVEDGVNVIGLTRGTDTKFHHSEKLDKGEVIIAQFTE     50

BSNT_03384___     51 HTSAIKVRGEALIQTAYGEMKSEKK     75
                     |||||||||.||||||||||.||||
RBAM_020930__     51 HTSAIKVRGNALIQTAYGEMNSEKK     75


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