Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03357 and RBAM_020730

See DNA alignment / Visit BSNT_03357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_03357___ypiF.1.9828.seq
#    -bsequence pep-align/RBAM_020730___ypiF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03357___ypiF-RBAM_020730___ypiF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03357___ypiF-RBAM_020730___ypiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03357___ypiF
# 2: RBAM_020730___ypiF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      86/148 (58.1%)
# Similarity:   108/148 (73.0%)
# Gaps:           0/148 ( 0.0%)
# Score: 439.0
# 
#
#=======================================

BSNT_03357___      1 MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEE     50
                     ||||..||..|||:.|||||||||||:|..:...|.|.|:||.|||||||
RBAM_020730__      1 MRWRAADADAYLQSADYIDTAVIPLISITSSGGLKEAVEQGESTQLLSEE     50

BSNT_03357___     51 LERQLKGRVYLLPPYTYVDRNEITVQGLKDLREELITEFPHVVLLTSDES    100
                     |||||||||||.|.|||||.::..:..|:.|::|::|.|.||:.||:||.
RBAM_020730__     51 LERQLKGRVYLFPSYTYVDIDQSQIALLQKLKDEVMTNFRHVLFLTADEK    100

BSNT_03357___    101 WRAEDALGKMIVTPSVPLEHLNDSLKRKILDERTAEILNVLLQLWSTS    148
                     |:..:....:|..|:||.||:.|||||||.|::..||||||||.|:.|
RBAM_020730__    101 WKDSEIGSDVIYIPAVPFEHMKDSLKRKIADDKCGEILNVLLQKWNNS    148


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