Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03282 and RBAM_020170

See DNA alignment / Visit BSNT_03282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_03282___ypbS.1.9828.seq
#    -bsequence pep-align/RBAM_020170___ypbS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03282___ypbS-RBAM_020170___ypbS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03282___ypbS-RBAM_020170___ypbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03282___ypbS
# 2: RBAM_020170___ypbS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 85
# Identity:      59/85 (69.4%)
# Similarity:    73/85 (85.9%)
# Gaps:           0/85 ( 0.0%)
# Score: 313.0
# 
#
#=======================================

BSNT_03282___      1 MSEVHKAISAHSSKQHEHIKAFMRLENMRELAIEEVVAKCRNDEPYTTDA     50
                     ||||||||||||:|||:|:|.|::|:..||.||||.:.|||.::|:||||
RBAM_020170__      1 MSEVHKAISAHSAKQHQHVKTFVQLDYEREQAIEEAIVKCRQNKPFTTDA     50

BSNT_03282___     51 INEITEQMNQLAKKGIVPTRRLVSKEMVREYVSRM     85
                     ||.||.:|||||||||||.||.||:|||:|:|||.
RBAM_020170__     51 INGITAKMNQLAKKGIVPQRRFVSEEMVKEFVSRQ     85


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