Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03278 and RBAM_020140

See DNA alignment / Visit BSNT_03278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_03278___sspL.1.9828.seq
#    -bsequence pep-align/RBAM_020140___sspL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03278___sspL-RBAM_020140___sspL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03278___sspL-RBAM_020140___sspL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03278___sspL
# 2: RBAM_020140___sspL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 42
# Identity:      29/42 (69.0%)
# Similarity:    35/42 (83.3%)
# Gaps:           0/42 ( 0.0%)
# Score: 161.0
# 
#
#=======================================

BSNT_03278___      1 MKKKDKGRLTGGVTPQGDLEGKTHNDPKTELEERAKKSNTKR     42
                     |:|::||||||||.|||::||..|.|||:.||..||||||||
RBAM_020140__      1 MRKENKGRLTGGVNPQGNMEGNAHKDPKSALENNAKKSNTKR     42


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.