Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03267 and RBAM_020050

See DNA alignment / Visit BSNT_03267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence pep-align/BSNT_03267.1.9828.seq
#    -bsequence pep-align/RBAM_020050___metA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03267-RBAM_020050___metA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03267-RBAM_020050___metA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03267
# 2: RBAM_020050___metA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     270/301 (89.7%)
# Similarity:   287/301 (95.3%)
# Gaps:           0/301 ( 0.0%)
# Score: 1492.0
# 
#
#=======================================

BSNT_03267         1 MPINIPTHLPAKQVLESEQIFVMDESRAFHQDIRPQKIIILNLMPKKIQT     50
                     ||||||.|||||||||||.|||||||||||||||||||:|||||||||||
RBAM_020050__      1 MPINIPNHLPAKQVLESEHIFVMDESRAFHQDIRPQKIVILNLMPKKIQT     50

BSNT_03267        51 ETQLLRLLGNSPLQVHFTFLIPSTHTPKNTAREHLDEFYTTFSNIRHKRF    100
                     ||||||:|||||||||||||||||||||||||:|||||||.||:||||||
RBAM_020050__     51 ETQLLRMLGNSPLQVHFTFLIPSTHTPKNTARQHLDEFYTDFSSIRHKRF    100

BSNT_03267       101 DGMIITGAPIEHLAFEEVSYWEELKEIMEWSKTNVTSTLHICWGAQAGLY    150
                     |||||||||||||.||:|||||||||||||||||||||||||||||||||
RBAM_020050__    101 DGMIITGAPIEHLPFEDVSYWEELKEIMEWSKTNVTSTLHICWGAQAGLY    150

BSNT_03267       151 YHYGVEKIQMPKKIFGVFEHTVLSKHERLVRGFDELYYVPHSRHTDINME    200
                     ||||:||:::|||||||||||||.||||||||||||||||||||||||.|
RBAM_020050__    151 YHYGIEKVELPKKIFGVFEHTVLKKHERLVRGFDELYYVPHSRHTDINTE    200

BSNT_03267       201 QLQAVPDLNILTASKEAGVCLIVSKDEKQVFLTGHPEYDTNTLLQEYERD    250
                     |||:..||::|:.|:||||||||||||||:||||||||||:|||||||||
RBAM_020050__    201 QLQSASDLDVLSVSEEAGVCLIVSKDEKQIFLTGHPEYDTDTLLQEYERD    250

BSNT_03267       251 LERNLSTVEEPKHYFAKGSNEPVNRWKAHATLLFMNWLNYYVYQETPYEW    300
                     :|||||.||.||||||.|..||||||||||||||||||||||||||||||
RBAM_020050__    251 IERNLSNVEAPKHYFAPGGKEPVNRWKAHATLLFMNWLNYYVYQETPYEW    300

BSNT_03267       301 D    301
                     |
RBAM_020050__    301 D    301


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