Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03264 and RBAM_020030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence pep-align/BSNT_03264___ypgQ.1.9828.seq
# -bsequence pep-align/RBAM_020030___ypgQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03264___ypgQ-RBAM_020030___ypgQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03264___ypgQ-RBAM_020030___ypgQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03264___ypgQ
# 2: RBAM_020030___ypgQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity: 110/214 (51.4%)
# Similarity: 139/214 (65.0%)
# Gaps: 9/214 ( 4.2%)
# Score: 555.0
#
#
#=======================================
BSNT_03264___ 1 MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFI 50
|.|.:|.|.:|.||:..|.:|.:||||.|:||||.|:.|:.::|.|||||
RBAM_020030__ 1 MNEKEQLESVRNWVKEKLINERTGHDWLHISRVATLSVYMAKEEGADLFI 50
BSNT_03264___ 51 VETAALVHDLIDVKLPDTVRLSVSEVYDQLVFFGVGKDNADRVIHIITRM 100
.|||||||||||.||..:.||:..||.::|..|.:..|:...:..|||||
RBAM_020030__ 51 TETAALVHDLIDAKLEKSERLTAGEVTERLAAFNIAADSIQEITDIITRM 100
BSNT_03264___ 101 SFRDRGKLAKEPLSIEGKAVQDADRLDAIGAVGIARAFMFAGAKGHGLYG 150
|||.|..|.|.|||:|||.|||||.||||||.||.|||||||||||.:||
RBAM_020030__ 101 SFRHRELLIKRPLSLEGKVVQDADMLDAIGAAGIGRAFMFAGAKGHPMYG 150
BSNT_03264___ 151 DEQSAYAHFFHKLLRLKDMMNTDTARELAEERHNFMLQFVRQLEKEIPGI 200
.:.|..||...||::||.:|||.....||||||.|:|||..:::|....:
RBAM_020030__ 151 AQTSVLAHIEDKLIKLKGLMNTKAGAGLAEERHQFLLQFAARIQKRGRHL 200
BSNT_03264___ 201 DAKTS--------- 205
...:.
RBAM_020030__ 201 QKLSGAIERLCRLC 214
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