Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03225 and RBAM_019590

See DNA alignment / Visit BSNT_03225 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:19
# Commandline: needle
#    -asequence pep-align/BSNT_03225___cgeE.1.9828.seq
#    -bsequence pep-align/RBAM_019590___cgeE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03225___cgeE-RBAM_019590___cgeE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03225___cgeE-RBAM_019590___cgeE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03225___cgeE
# 2: RBAM_019590___cgeE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     173/273 (63.4%)
# Similarity:   206/273 (75.5%)
# Gaps:          14/273 ( 5.1%)
# Score: 918.0
# 
#
#=======================================

BSNT_03225___      1 --------------MTGHYSKTEHQYILLTSESASFDHYSVYRDPQLPQI     36
                                   ||..:.|||.|||.|||....|:|:|||.||.||||
RBAM_019590__      1 MRDAVGCVRKRRAFMTDQFDKTEKQYIELTSGIQRFEHFSVYTDPFLPQI     50

BSNT_03225___     37 FSHNFVQLHDTFPLERLLNFLPSVPKLLDANYLHLKASPQHVFPLGLKQS     86
                     |||||||||.||||::||.|..|||.:|.|||:|:||:|:|.|||.|||:
RBAM_019590__     51 FSHNFVQLHRTFPLDKLLPFFSSVPGMLQANYIHVKAAPEHAFPLLLKQT    100

BSNT_03225___     87 LVKSGFVVEDELLYDMKLSDWKGQMGHPLTAWGTAKSLCDGSSIMKIYDS    136
                     |||.|.||||||.:..||.:...|.|||||||||.|||.||:|||.|||:
RBAM_019590__    101 LVKQGCVVEDELFFARKLENGDLQAGHPLTAWGTEKSLADGASIMNIYDA    150

BSNT_03225___    137 IYIGEAIAEQKLKRKYPFYEAGIIILVVCYSDQAQKVPIGCGELFIDHQE    186
                     :|||||.|||||:||||.|:.|.|:|||||||.:|.:|||||||||:..:
RBAM_019590__    151 LYIGEAAAEQKLERKYPLYKDGTIMLVVCYSDASQTIPIGCGELFINKAD    200

BSNT_03225___    187 KTAKIEEVAILDQFQRKGYGSILVKEMLSIAKSLGMEAAYLVAASTDGAT    236
                     |||||||||||||||||||||||:.|:::.||..||:..|||.:..||..
RBAM_019590__    201 KTAKIEEVAILDQFQRKGYGSILMNELMAAAKLNGMDTVYLVTSGMDGVN    250

BSNT_03225___    237 QFYEKLTFKKYERVHTVFHYFLT    259
                     :|||||.||::.||||:||||||
RBAM_019590__    251 RFYEKLGFKRFRRVHTIFHYFLT    273


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