Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06255 and RBAM_019580

See DNA alignment / Visit BSNT_06255 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:42
# Commandline: needle
#    -asequence pep-align/BSNT_06255___yosT.1.9828.seq
#    -bsequence pep-align/RBAM_019580___yosT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06255___yosT-RBAM_019580___yosT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06255___yosT-RBAM_019580___yosT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06255___yosT
# 2: RBAM_019580___yosT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      52/149 (34.9%)
# Similarity:    60/149 (40.3%)
# Gaps:          78/149 (52.3%)
# Score: 278.0
# 
#
#=======================================

BSNT_06255___      1 MKITIEELPESRIAYFRNVGEYGEKQNKELMETFKKWAKLNDVFDNSTIL     50
                                                                       
RBAM_019580__      0 --------------------------------------------------      0

BSNT_06255___     51 GIPQDNPEITPKEECRYDVCVVINKDLNVKKPAHVGEFSGGKYAVFLLDH    100
                                                 :.:||.:|.|||||||||||||
RBAM_019580__      1 ----------------------------MPEPARIGTFSGGKYAVFLLDH     22

BSNT_06255___    101 TKEAVRDFWGNISSEIERNNLSIREQPIIERYTPQMIDNHLCEILIPIQ    149
                     |||||..||..:.||||:|||||||||||||||.|.:::||||.|||||
RBAM_019580__     23 TKEAVSGFWNTVFSEIEKNNLSIREQPIIERYTLQKVNHHLCEKLIPIQ     71


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