Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03212 and RBAM_019510

See DNA alignment / Visit BSNT_03212 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:17
# Commandline: needle
#    -asequence pep-align/BSNT_03212.1.9828.seq
#    -bsequence pep-align/RBAM_019510___yokU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03212-RBAM_019510___yokU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03212-RBAM_019510___yokU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03212
# 2: RBAM_019510___yokU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      67/92 (72.8%)
# Similarity:    76/92 (82.6%)
# Gaps:           0/92 ( 0.0%)
# Score: 370.0
# 
#
#=======================================

BSNT_03212         1 MKTCEWCGELEAVPGRNTVYWELPDGTRAIELTDTPAMVCSSCGMTYQEE     50
                     ||.|||||..:|...:..|||||||||||||:|:|||..|||||||||||
RBAM_019510__      1 MKPCEWCGNQKASACQAAVYWELPDGTRAIEITETPAFACSSCGMTYQEE     50

BSNT_03212        51 NTVKEIEDQLLLIQTKKLPESLTYQQLMETERILKRNYFDFS     92
                     ..:.|||:||.|:..|||||:||||:||||||||||||||||
RBAM_019510__     51 AVIAEIENQLFLVNAKKLPETLTYQELMETERILKRNYFDFS     92


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