Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06150 and RBAM_019370

See DNA alignment / Visit BSNT_06150 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:37
# Commandline: needle
#    -asequence pep-align/BSNT_06150___yydK.1.9828.seq
#    -bsequence pep-align/RBAM_019370___yydK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06150___yydK-RBAM_019370___yydK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06150___yydK-RBAM_019370___yydK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06150___yydK
# 2: RBAM_019370___yydK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     181/241 (75.1%)
# Similarity:   212/241 (88.0%)
# Gaps:           5/241 ( 2.1%)
# Score: 957.0
# 
#
#=======================================

BSNT_06150___      1 MLKYQQIAAEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKSLELL     50
                     ||||||||.:||.||||||||||||||||:|||::|.||||||||||:||
RBAM_019370__      1 MLKYQQIAIDIEKYIEEHQLQQGDKLPVLQTLMSRFNVSKSTITKSLDLL     50

BSNT_06150___     51 EQKGAIFQVRGSGIFVRKHKRKGYISLLSNQGFKKDLEDFNVTSKVIELD    100
                     |:||.:|||||||||||::|||||||||||||||:.|||||||||::.|:
RBAM_019370__     51 EKKGIVFQVRGSGIFVRRNKRKGYISLLSNQGFKESLEDFNVTSKLLALE    100

BSNT_06150___    101 VRKPTPEAAENLNIEINEDIYYVKRVRYINGQTLCYEESYYNKSIVTYLN    150
                     |||||||||:|||:..:.|:|||||:|||:|.|||.|||:|||||:||||
RBAM_019370__    101 VRKPTPEAAQNLNMPPDGDVYYVKRIRYIDGLTLCIEESFYNKSIITYLN    150

BSNT_06150___    151 NEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLPKLY    200
                     .|||:.|||.|||||||||.|||||:|:.|.|||||||||||..|.|||.
RBAM_019370__    151 KEIVAESIFDYIREGLGLKRGFSDLYLYAGMLNEEEAEYLGLFTGAPKLC    200

BSNT_06150___    201 IESIFHLTNGQPFDYSKISYNYEQSQFVVQANSFLL-----    236
                     :|:|||||||||||:||::|:||||||.:||||.|.     
RBAM_019370__    201 VETIFHLTNGQPFDFSKVTYHYEQSQFFIQANSHLFEQETT    241


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.