Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03172 and RBAM_019250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence pep-align/BSNT_03172___yojE.1.9828.seq
# -bsequence pep-align/RBAM_019250___yojE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03172___yojE-RBAM_019250___yojE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03172___yojE-RBAM_019250___yojE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03172___yojE
# 2: RBAM_019250___yojE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity: 226/298 (75.8%)
# Similarity: 257/298 (86.2%)
# Gaps: 0/298 ( 0.0%)
# Score: 1210.0
#
#
#=======================================
BSNT_03172___ 1 MQYSETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFM 50
||.:..:||:||||.||.||||||:|||||||:||||||||||:||||||
RBAM_019250__ 1 MQGNNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFM 50
BSNT_03172___ 51 CIVLFFLRQWKIGWQELRSLKKNGGILSLFLASILISINWFVYIWAVNHG 100
|::|..|::||.||:|||.||..||:|:||.||:|||:||||||||||||
RBAM_019250__ 51 CVLLTVLKKWKTGWRELRLLKSEGGLLALFFASVLISVNWFVYIWAVNHG 100
BSNT_03172___ 101 FLLEASLGYYINPLVSVLLGILFLKEKLNRLQLVAVSIAAAGVIISAFQY 150
|||||||||||||||||||||||||||||::|..|||||.|.||||||||
RBAM_019250__ 101 FLLEASLGYYINPLVSVLLGILFLKEKLNKMQTAAVSIAGAAVIISAFQY 150
BSNT_03172___ 151 GSIPYVALLLAFSFGLYGLSKKRTSLPSAIGLTLETFMIMPIALGYLLFS 200
|::||:|||||||||||||.||||.:.|.|||||||.:|.|.||.||.::
RBAM_019250__ 151 GAVPYIALLLAFSFGLYGLCKKRTRMSSTIGLTLETLLITPAALIYLGYT 200
BSNT_03172___ 201 GHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPLYQVGILQYIA 250
.....:|:...|||.|||.|||||||||||||||||||||||||||||||
RBAM_019250__ 201 ADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPLYQVGILQYIA 250
BSNT_03172___ 251 PTITLLIGLFVYHEPFSSSKAFTFSCIWAALILFTFSQVKWKRASKSH 298
|||||::|:||||||||..|||||.||||||:||||||:||||..||.
RBAM_019250__ 251 PTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR 298
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