Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03169 and RBAM_019240

See DNA alignment / Visit BSNT_03169 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03169.1.9828.seq
#    -bsequence pep-align/RBAM_019240.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03169-RBAM_019240.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03169-RBAM_019240.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03169
# 2: RBAM_019240
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      56/92 (60.9%)
# Similarity:    70/92 (76.1%)
# Gaps:           0/92 ( 0.0%)
# Score: 286.0
# 
#
#=======================================

BSNT_03169         1 MDNDKEIVKAYASLWNNRSLAHDDAEAVAEAIDLELLDKRTHPRLRKPML     50
                     |..||:|.|||.:|||||:|.....|...:||||||||:||||||||...
RBAM_019240        1 MGTDKDIAKAYQALWNNRTLPASTLEEAEKAIDLELLDQRTHPRLRKSPE     50

BSNT_03169        51 EKYFAAIQRIVNSQLEPAVKYQLVKLHTERAEYLKEERGEQS     92
                     ||:..|:||||:|:|.|..||:||:|||:|.::||||||||.
RBAM_019240       51 EKFALAVQRIVDSRLRPIEKYELVELHTKRLQFLKEERGEQL     92


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