Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03166 and RBAM_019210

See DNA alignment / Visit BSNT_03166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03166___yojH.1.9828.seq
#    -bsequence pep-align/RBAM_019210___yojH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03166___yojH-RBAM_019210___yojH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03166___yojH-RBAM_019210___yojH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03166___yojH
# 2: RBAM_019210___yojH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     196/282 (69.5%)
# Similarity:   249/282 (88.3%)
# Gaps:           0/282 ( 0.0%)
# Score: 1058.0
# 
#
#=======================================

BSNT_03166___      1 MAKNKKLFEYLSQHAETISSTWYETIEETDPNSIYASTDPVVIHNLKSQN     50
                     |.|:|.|::||::.||.||.||::|:.:|||:|:||||||.|:.|||.||
RBAM_019210__      1 MPKHKLLYDYLTERAEDISQTWFDTLHDTDPDSVYASTDPAVLTNLKKQN     50

BSNT_03166___     51 LAFNYKINRIFIDDEDVYLPILKEWAFEVTQDQEHLKTPIHYIIREFVRV    100
                     |||||::||||.::::||...|::||||..:|:||||||||||||||:||
RBAM_019210__     51 LAFNYQLNRIFSEEKEVYTAALEKWAFEAARDEEHLKTPIHYIIREFIRV    100

BSNT_03166___    101 RDLYVSYVKEFVHLNQDTVKSEEAEDLYHALIKAFDLVIHIFIEEMYKNT    150
                     |||||.:||:|..|:.|||..|:|||::|.|||:||:|||||||||||||
RBAM_019210__    101 RDLYVGHVKQFTRLHADTVTEEDAEDIFHTLIKSFDVVIHIFIEEMYKNT    150

BSNT_03166___    151 SLQLQAQKDMITELSAPVIVLFHSVGLLPLIGDIDTVRAKLIMENTLHQC    200
                     ::||:|||::|||||:||||||.:||||||||||||.|||:|:|||||||
RBAM_019210__    151 NIQLEAQKELITELSSPVIVLFDNVGLLPLIGDIDTARAKMILENTLHQC    200

BSNT_03166___    201 AKKKVTQLYIDLSGVAVIDTMVAHQLFSLIEALRLIGVSSTLSGIRPEIA    250
                     ::|::|||||||||||:||||||.|||:|||:|.::||.:||||||||||
RBAM_019210__    201 SEKRITQLYIDLSGVAMIDTMVAQQLFTLIESLGMLGVKATLSGIRPEIA    250

BSNT_03166___    251 QTAVQLGLSFEGISLRSTLASAIASDLKLKKV    282
                     ||||||||||..:|:||:||.||||||..||.
RBAM_019210__    251 QTAVQLGLSFSNLSIRSSLAEAIASDLTQKKG    282


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