Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03123 and RBAM_018940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03123___yocD.1.9828.seq
# -bsequence pep-align/RBAM_018940___yocD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03123___yocD-RBAM_018940___yocD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03123___yocD-RBAM_018940___yocD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03123___yocD
# 2: RBAM_018940___yocD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity: 248/325 (76.3%)
# Similarity: 279/325 (85.8%)
# Gaps: 0/325 ( 0.0%)
# Score: 1296.0
#
#
#=======================================
BSNT_03123___ 1 MYASKLKKGDEIRIVSPATSMSILSNEAKIQAKTALERLGYRVTIAEHAN 50
||..||||||.|||||||||||::|:|....|||.||.||:.|:.:|:|.
RBAM_018940__ 1 MYPEKLKKGDGIRIVSPATSMSVMSDENINAAKTKLEELGFCVSFSENAK 50
BSNT_03123___ 51 ECNEFDSSSIESRVQDLHAAFFDPGVKAILTTLGGFNSNQLLRYLDYEKI 100
|.||||||||||||:|||.||.||.:||||||||||.|||||||||||.|
RBAM_018940__ 51 EINEFDSSSIESRVRDLHEAFADPDIKAILTTLGGFQSNQLLRYLDYENI 100
BSNT_03123___ 101 KRHPKILCGYSDITALCNAIYQKTGLVTYSGPFFSTFAMKKGLDYTQEYF 150
||||||||||||||||.:||||||||:|||||.||:||||||||||...|
RBAM_018940__ 101 KRHPKILCGYSDITALGHAIYQKTGLITYSGPHFSSFAMKKGLDYTINSF 150
BSNT_03123___ 151 LSCCASDDPFEILPSSEWSDDRWFLDQENRRFYPNNGPVVIQEGYAEGTL 200
|:|||||.|:|:.||||||||:|:|:||:||||.|.||:|||.|||||||
RBAM_018940__ 151 LACCASDSPYEVKPSSEWSDDKWYLNQEDRRFYRNPGPLVIQPGYAEGTL 200
BSNT_03123___ 201 IGGNLCTLNLLQGTEYFPETEHTILLIEDDYMSDIHMFDRDLQSLIHLPA 250
|||||||||||||||||||.|..||.||||:|||||||||||||||||||
RBAM_018940__ 201 IGGNLCTLNLLQGTEYFPEMEQVILFIEDDHMSDIHMFDRDLQSLIHLPA 250
BSNT_03123___ 251 FSHVKAILIGRFQKASNVSMDLVKAMIETKKELSGIPVIANINAGHTSPI 300
||.||.|:|||||.|||||.:.::|:|.||:|||.:|||||.:.|||||:
RBAM_018940__ 251 FSAVKGIVIGRFQHASNVSEEALRAVIRTKEELSSMPVIANADFGHTSPL 300
BSNT_03123___ 301 ATFPIGGTCRIEAISGTSRIWIDKH 325
.||||||||||||.|...|||||:|
RBAM_018940__ 301 MTFPIGGTCRIEAGSEGGRIWIDRH 325
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