Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03097 and RBAM_018820

See DNA alignment / Visit BSNT_03097 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03097___yobK.1.9828.seq
#    -bsequence pep-align/RBAM_018820___yobK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03097___yobK-RBAM_018820___yobK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03097___yobK-RBAM_018820___yobK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03097___yobK
# 2: RBAM_018820___yobK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:      81/154 (52.6%)
# Similarity:   108/154 (70.1%)
# Gaps:           2/154 ( 1.3%)
# Score: 443.0
# 
#
#=======================================

BSNT_03097___      1 -MIYSKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEK     49
                      ..|.||:.||.:|.:...||.|...:.|.:||::||..||:||||||.|
RBAM_018820__      1 MDFYLKVKEFIADNAKEKDFTGGIGEDKILKIEQDLQVTLPDSYKWFLRK     50

BSNT_03097___     50 YGAGGLFGVLVLGYNFDHASVVNRTNEYKEHYGLTDGLVVIEDVDYFAYC     99
                     ||:||::|:.:|||:|..||||..|.||.|:.||..||||||.||:|.||
RBAM_018820__     51 YGSGGVYGIDLLGYDFGGASVVETTREYHEYRGLPSGLVVIEHVDFFGYC    100

BSNT_03097___    100 LDTNKM-KDGECPVVEWDRVIGYQDTVADSFIEFFYNKIQEAKDDWDEDE    148
                     |||||: .:||||||.|....||::..:..||:|||.::.|.|::|:||.
RBAM_018820__    101 LDTNKINSEGECPVVIWSEFGGYKELNSAHFIKFFYERLHEMKENWEEDA    150

BSNT_03097___    149 DWDD    152
                     ||||
RBAM_018820__    151 DWDD    154


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