Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03072 and RBAM_018730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03072___yoxB.1.9828.seq
# -bsequence pep-align/RBAM_018730___yoxB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03072___yoxB-RBAM_018730___yoxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03072___yoxB-RBAM_018730___yoxB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03072___yoxB
# 2: RBAM_018730___yoxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 134/258 (51.9%)
# Similarity: 175/258 (67.8%)
# Gaps: 7/258 ( 2.7%)
# Score: 679.5
#
#
#=======================================
BSNT_03072___ 1 MIVNHSCLKEFAEKLHSLPSSL--TKSDLLISPFHLHQENELDIYYSPHN 48
||.:...|..|.::|.:|.||: ||||||...|||.::.:||:||||||
RBAM_018730__ 1 MICDRERLAHFLQQLKALSSSVGFTKSDLLTPAFHLAKDGDLDLYYSPHN 50
BSNT_03072___ 49 EYINRTATIVIAGITPGFSQMKTAYETAVESLRQGRTLEQMAVDTKIAAG 98
||||..|.:.|:||||||.||:.||:.|.:.|:.|.|||.:|.:||.|||
RBAM_018730__ 51 EYINPYAVVAISGITPGFFQMQLAYKKAAQLLKDGETLETIAYETKKAAG 100
BSNT_03072___ 99 FSGSMRHNLITMLDLCGLPQAFGIQSAAKLFGELRHMLHTTSVIKYPVFI 148
.|||||.|:|.||:.||||.|..::.:::||...|.:||||||||:|||.
RBAM_018730__ 101 LSGSMRQNIIEMLNECGLPAALHVEDSSRLFDSKRELLHTTSVIKHPVFY 150
BSNT_03072___ 149 QQKNYTGYKPAITRSPILSTYAFGHFPAELNHVTGPALLIPLGKAAETVC 198
:||||||::|||:||.:||.||...||.|:..:....||||||||||:.|
RBAM_018730__ 151 KQKNYTGHRPAISRSALLSRYALTCFPDEIEMMKKDILLIPLGKAAESAC 200
BSNT_03072___ 199 ETLIRQHSLQNLICLNGFPHPSGANGHRLKQFSKNKEQLETQIRSFAALF 248
..|.:...:.:.:.|.||||||||||||.|||.:||:.|..||:.||...
RBAM_018730__ 201 RMLKKNGRMGHAVILEGFPHPSGANGHRFKQFHENKQSLREQIQRFAGFL 250
BSNT_03072___ 249 DFAIEKRK 256
...
RBAM_018730__ 251 QQL----- 253
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