Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03060 and RBAM_018650

See DNA alignment / Visit BSNT_03060 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03060.1.9828.seq
#    -bsequence pep-align/RBAM_018650___proH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03060-RBAM_018650___proH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03060-RBAM_018650___proH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03060
# 2: RBAM_018650___proH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     114/299 (38.1%)
# Similarity:   128/299 (42.8%)
# Gaps:         147/299 (49.2%)
# Score: 562.0
# 
#
#=======================================

BSNT_03060         0 --------------------------------------------------      0
                                                                       
RBAM_018650__      1 MKNTNKIRTREMLPILDQKKVAFIGAGSMAEGMISGMVRAKKIPNQNICV     50

BSNT_03060         0 --------------------------------------------------      0
                                                                       
RBAM_018650__     51 TNRRNTERLAELEHQYGIQGIAFDSMKTEDIDVFILAMKPKDAEIALAAL    100

BSNT_03060         1 -----------------------------------------MIGASATAI      9
                                                              |||.||||.
RBAM_018650__    101 KRRIQPHQIILSVLAGITTSFIQQSLHDNQPVVRVMPNTSSMIGESATAA    150

BSNT_03060        10 ALGKYVSEDLKKLAEALLGCMGEVYTIQENQMDIFTGIAGSGPAYFYYLT     59
                     |.|.:||....|.|.:||.|:||||.|:|:|||||||||||||||||||.
RBAM_018650__    151 AFGDHVSYGSAKTAVSLLECLGEVYVIKEDQMDIFTGIAGSGPAYFYYLM    200

BSNT_03060        60 EFIEKTGEEAGLDKQLSRSIGAQTLLGAAKMLMETGEHPEILRDNITSPN    109
                     |||||.||||||||:|||.||||||||||||||||||.|::||:||||||
RBAM_018650__    201 EFIEKAGEEAGLDKRLSRKIGAQTLLGAAKMLMETGEKPDVLRENITSPN    250

BSNT_03060       110 GTTAAGLQALKKSGGGEAISQAIKHAAKRSKEISEGIEKTAAPLSGVIK    158
                     |||.|||.||:..||||||::|||||.:||.|||:.||||||.      
RBAM_018650__    251 GTTEAGLDALRSEGGGEAIAKAIKHATERSIEISKTIEKTAAL------    293


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