Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03017 and RBAM_018360

See DNA alignment / Visit BSNT_03017 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_03017.1.9828.seq
#    -bsequence pep-align/RBAM_018360.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03017-RBAM_018360.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03017-RBAM_018360.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03017
# 2: RBAM_018360
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      51/74 (68.9%)
# Similarity:    60/74 (81.1%)
# Gaps:           5/74 ( 6.8%)
# Score: 270.0
# 
#
#=======================================

BSNT_03017         1 -MTVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVK     49
                      ..:.|||||||||:|||.||.||:||||||||||||||||:||.:|.||
RBAM_018360        1 MSVIKIQMAGNLWKIHVKPGDVIEEGQEVAILESMKMEIPIIADAAGTVK     50

BSNT_03017        50 EVKKNEGDFVNEGDVLLELSNSTQ     73
                     ||||:||||.:||:||:||.    
RBAM_018360       51 EVKKSEGDFTDEGEVLIELQ----     70


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