Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03008 and RBAM_018300

See DNA alignment / Visit BSNT_03008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence pep-align/BSNT_03008___yngA.1.9828.seq
#    -bsequence pep-align/RBAM_018300___yngA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03008___yngA-RBAM_018300___yngA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03008___yngA-RBAM_018300___yngA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03008___yngA
# 2: RBAM_018300___yngA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     119/148 (80.4%)
# Similarity:   125/148 (84.5%)
# Gaps:          13/148 ( 8.8%)
# Score: 633.0
# 
#
#=======================================

BSNT_03008___      1 MTATRIFYEGRSVTLKEKIKTLGRFCTVGVGNTLIDFGVFFLLTACHVSY     50
                                  .||||:||.|||||||||||||||||||||.||||.|
RBAM_018300__      1 -------------MLKEKVKTAGRFCTVGVGNTLIDFGVFFLLAACHVPY     37

BSNT_03008___     51 LPAQICSYTAGIVNSYVWNRNWTFCVKRKADGKEIVRFLMINIAASGITF    100
                     ||||||||:|||:|||||||.|||.||||||||||:||:|||:|||||||
RBAM_018300__     38 LPAQICSYSAGIINSYVWNRKWTFRVKRKADGKEIMRFVMINLAASGITF     87

BSNT_03008___    101 LLLYLFQNCGCSLLVSKLAATIGGMMMNFIGNRIWVFGDSLKNIQDQE    148
                     ||||.||..||||||||.||||||||||||||||||||||||||||||
RBAM_018300__     88 LLLYAFQKGGCSLLVSKFAATIGGMMMNFIGNRIWVFGDSLKNIQDQE    135


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