Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05967 and RBAM_018230
See
DNA alignment /
Visit
BSNT_05967 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:28
# Commandline: needle
# -asequence pep-align/BSNT_05967___yxjC.1.9828.seq
# -bsequence pep-align/RBAM_018230___yxjC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05967___yxjC-RBAM_018230___yxjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05967___yxjC-RBAM_018230___yxjC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05967___yxjC
# 2: RBAM_018230___yxjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 385/478 (80.5%)
# Similarity: 425/478 (88.9%)
# Gaps: 6/478 ( 1.3%)
# Score: 1958.5
#
#
#=======================================
BSNT_05967___ 1 MELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSI 50
|:::|||||||:|||.|||||||||||||||||||||||||.||||||:|
RBAM_018230__ 1 MDIVIILLALGMLMFAAYRGFSVILFAPICALFAVLLTDPSFVLPFFSNI 50
BSNT_05967___ 51 FMEKMAGFIKLYFPVFLLGAIFGKVVEMAGLAVSIAKTIVRLVGAKRAIL 100
|||||.||||||||||||||:||||||::|||.|||||||||||||||||
RBAM_018230__ 51 FMEKMVGFIKLYFPVFLLGAVFGKVVEISGLAESIAKTIVRLVGAKRAIL 100
BSNT_05967___ 101 AIVLMGAVLTYSGVSLFVVVFAVYPFAKNMFQEANIPKRLIPGTIALGAF 150
|||||||:||||||||||.|||:||||||:|.:|:|||||||||||||||
RBAM_018230__ 101 AIVLMGAILTYSGVSLFVAVFAIYPFAKNLFIKADIPKRLIPGTIALGAF 150
BSNT_05967___ 151 TFTMDALPGTPQIQNVIPTSFFKTDIYAAPWLGLMGAVIVLAAGMLYLES 200
|||||||||||||||||||:||||:|||||||||:||..||.|||:||||
RBAM_018230__ 151 TFTMDALPGTPQIQNVIPTAFFKTNIYAAPWLGLIGAAFVLTAGMIYLES 200
BSNT_05967___ 201 RRKKAQASGEGYGGFDSQNAPAPESIESAAE------PEKSPIRHALAFV 244
|||||..:||||.||..:.:.|.||...|.| |:.||.|..||||
RBAM_018230__ 201 RRKKAANAGEGYAGFQPEVSAAEESSSLANETHTPVLPQPSPARQVLAFV 250
BSNT_05967___ 245 PLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEI 294
||||||.:||.||::||.|||:||||:.:||:.||::|:||..||||||:
RBAM_018230__ 251 PLILVGVMNKCFTMWLPHWYPDGFDFAPLGLEAFGKIDLSSVTAIWSVEL 300
BSNT_05967___ 295 ALVIGIITTILFDWRSVFAQLKEGLNEGIGGALLASMNTGAEYGFGGIIA 344
||.|||:|||||||:.|...||||||||||||||||||||||||||||||
RBAM_018230__ 301 ALFIGIMTTILFDWKKVLFNLKEGLNEGIGGALLASMNTGAEYGFGGIIA 350
BSNT_05967___ 345 ALPGFHKLSSGISHTFTDPLVNGAVTTTALAGITGSASGGMGIALSAMSE 394
|||||..:|||||.||||||||||||||||||||||||||||||||.||.
RBAM_018230__ 351 ALPGFKMVSSGISQTFTDPLVNGAVTTTALAGITGSASGGMGIALSTMSA 400
BSNT_05967___ 395 QYLQAIQAYNIPPEVMHRVISMASGGMDTLPHNGAVITLLAVTGLTHRQS 444
.|.:||..::||||||||||||||||||||||||||||||||||||||||
RBAM_018230__ 401 AYTEAINTFHIPPEVMHRVISMASGGMDTLPHNGAVITLLAVTGLTHRQS 450
BSNT_05967___ 445 YRDIFAITLIKTAAVFAVIAIYSLTGLV 472
||||||||:|||||||.:||||||||||
RBAM_018230__ 451 YRDIFAITVIKTAAVFVIIAIYSLTGLV 478
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.