Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02095 and RBAM_017990

See DNA alignment / Visit BSNT_02095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence pep-align/BSNT_02095___yjmF.1.9828.seq
#    -bsequence pep-align/RBAM_017990___yjmF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02095___yjmF-RBAM_017990___yjmF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02095___yjmF-RBAM_017990___yjmF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02095___yjmF
# 2: RBAM_017990___yjmF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     207/278 (74.5%)
# Similarity:   242/278 (87.1%)
# Gaps:           0/278 ( 0.0%)
# Score: 1079.0
# 
#
#=======================================

BSNT_02095___      1 MIPLHENLTGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAV     50
                     |.|:||.|:|:||||||||||||||||:||:|.|||:||::|..:|.:..
RBAM_017990__      1 MKPIHERLSGRTAVITGGSGVLCSAMAKELSRQGMKIAIVSRNTDKAERA     50

BSNT_02095___     51 VKEITAAGGTACAVAADVLDRMSLERAKEDILGQFGAVDLLINGAGGNHP    100
                     ..||..|||||.:|.|||..|.|||:||::|:.:||:|:|||||||||||
RBAM_017990__     51 AGEIADAGGTAVSVPADVSARDSLEKAKDEIISRFGSVNLLINGAGGNHP    100

BSNT_02095___    101 DAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLK    150
                     ||||..|||||..:|.|||||||.||.:||||||||||||||||||:|||
RBAM_017990__    101 DAITASETYEEDEQGTSFFDMDETGFSSVFSTNFTGAFLASQVFGKDLLK    150

BSNT_02095___    151 ADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVN    200
                     |:.|||||:||||||:|||||||||||||::.|||||||||||:.|||||
RBAM_017990__    151 AECPAIINISSMSAYTPMTKVPAYSAAKAALQNFTMWMAVHFAKKGLRVN    200

BSNT_02095___    201 AIAPGFFLTKQNHDLLINQDGTFTSRSHKIIAGTPMKRFGKPEDLLGTLL    250
                     |||||||||.||..||:.:||:.|.||:||:|.|||||||||||||||||
RBAM_017990__    201 AIAPGFFLTAQNRGLLLQEDGSLTDRSNKIMAHTPMKRFGKPEDLLGTLL    250

BSNT_02095___    251 WLADESYSGFVTGITVPVDGGFMAYSGV    278
                     ||:|:|.||||||:||||||||||||||
RBAM_017990__    251 WLSDDSCSGFVTGVTVPVDGGFMAYSGV    278


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