Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02972 and RBAM_017770

See DNA alignment / Visit BSNT_02972 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_02972___cotM.1.9828.seq
#    -bsequence pep-align/RBAM_017770___cotM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02972___cotM-RBAM_017770___cotM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02972___cotM-RBAM_017770___cotM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02972___cotM
# 2: RBAM_017770___cotM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:      82/126 (65.1%)
# Similarity:    99/126 (78.6%)
# Gaps:           5/126 ( 4.0%)
# Score: 409.5
# 
#
#=======================================

BSNT_02972___      1 MNHSKRNDANDFDSMDEWLRQFFEDPFAWYDETLPIDLYETSQQYIIEAD     50
                     |||||  :|.:||..:||||||:|||:|||||||||||||||.|||||||
RBAM_017770__      1 MNHSK--NAEEFDDTEEWLRQFYEDPYAWYDETLPIDLYETSSQYIIEAD     48

BSNT_02972___     51 LTFLQPTQ-VTVTLSGCEFILTVKSSGQTFEKQMMLPFYFNDKNIQAECE     99
                     ||.|:..| :||||||.||:|:||:..:|..|||:||||.|||:|..:..
RBAM_017770__     49 LTMLKQVQAITVTLSGNEFMLSVKTLERTLNKQMVLPFYLNDKHIFTDFT     98

BSNT_02972___    100 NQILTVAVNKE-TEDGSSFSLQFPLS    124
                     |.||||::||| .|..:|||.|||| 
RBAM_017770__     99 NHILTVSMNKEPNETPASFSFQFPL-    123


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