Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02792 and RBAM_017170

See DNA alignment / Visit BSNT_02792 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02792___nrdI.1.9828.seq
#    -bsequence pep-align/RBAM_017170___nrdI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02792___nrdI-RBAM_017170___nrdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02792___nrdI-RBAM_017170___nrdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02792___nrdI
# 2: RBAM_017170___nrdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     127/130 (97.7%)
# Similarity:   127/130 (97.7%)
# Gaps:           0/130 ( 0.0%)
# Score: 642.0
# 
#
#=======================================

BSNT_02792___      1 MVQIIFDSKTGNVQRFVNKTGFQQIRKVDEMDHVDTPFVLVTYTTNFGQV     50
                     ||||||||||||||||||||.||.||||||.|||||||||||||||||||
RBAM_017170__      1 MVQIIFDSKTGNVQRFVNKTDFQLIRKVDETDHVDTPFVLVTYTTNFGQV     50

BSNT_02792___     51 PASTQSFLEKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017170__     51 PASTQSFLEKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFE    100

BSNT_02792___    101 LSGTSKDVELFTQEVERVVTKSSAKMDPVK    130
                     ||||||||||||||||||||||||||||||
RBAM_017170__    101 LSGTSKDVELFTQEVERVVTKSSAKMDPVK    130


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