Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02789 and RBAM_017140

See DNA alignment / Visit BSNT_02789 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_02789___hfq.1.9828.seq
#    -bsequence pep-align/RBAM_017140___hfq.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02789___hfq-RBAM_017140___hfq.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02789___hfq-RBAM_017140___hfq.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02789___hfq
# 2: RBAM_017140___hfq
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      70/73 (95.9%)
# Similarity:    73/73 (100.0%)
# Gaps:           0/73 ( 0.0%)
# Score: 361.0
# 
#
#=======================================

BSNT_02789___      1 MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGK     50
                     ||||||||||||||||:||:||||||||||||||||||||||||||:|||
RBAM_017140__      1 MKPINIQDQFLNQIRKDNTFVTVFLLNGFQLRGQVKGFDNFTVLLETEGK     50

BSNT_02789___     51 QQLIYKHAISTFAPQKNVQLELE     73
                     |||||||||||||||||||||||
RBAM_017140__     51 QQLIYKHAISTFAPQKNVQLELE     73


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