Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02749 and RBAM_016850

See DNA alignment / Visit BSNT_02749 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_02749___ymcB.1.9828.seq
#    -bsequence pep-align/RBAM_016850___ymcB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02749___ymcB-RBAM_016850___ymcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02749___ymcB-RBAM_016850___ymcB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02749___ymcB
# 2: RBAM_016850___ymcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 509
# Identity:     485/509 (95.3%)
# Similarity:   497/509 (97.6%)
# Gaps:           0/509 ( 0.0%)
# Score: 2540.0
# 
#
#=======================================

BSNT_02749___      1 MNEKQKLESGQVNPSDKKSEKDYSKYFEAVYIPPSLKDAKKRGKEAVTYH     50
                     ||||||.|||||||:||.|||||||||||||||||||||||||||:|.||
RBAM_016850__      1 MNEKQKQESGQVNPADKTSEKDYSKYFEAVYIPPSLKDAKKRGKESVQYH     50

BSNT_02749___     51 NDFKISEQFKGLGDGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSV    100
                     |||||||:|||||:||||||||||||||||||||||||||||||||||||
RBAM_016850__     51 NDFKISEEFKGLGEGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSV    100

BSNT_02749___    101 DDANVILLNTCAIRENAENKVFGELGHLKALKKNNPDLILGVCGCMSQEE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016850__    101 DDANVILLNTCAIRENAENKVFGELGHLKALKKNNPDLILGVCGCMSQEE    150

BSNT_02749___    151 SVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSKEMVVEVWSKEGDVI    200
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_016850__    151 SVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSKEMVIEVWSKEGDVI    200

BSNT_02749___    201 ENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEVR    250
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
RBAM_016850__    201 ENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEEIIQEVR    250

BSNT_02749___    251 RLASEGYKEITLLGQNVNAYGKDFEDMTYGLGDLMDELRKIDIPRIRFTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016850__    251 RLASEGYKEITLLGQNVNAYGKDFEDMTYGLGDLMDELRKIDIPRIRFTT    300

BSNT_02749___    301 SHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYME    350
                     ||||||||.||||||||||||||||||||||||.:||:||||||||||:|
RBAM_016850__    301 SHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSAMLKMMARKYDRERYLE    350

BSNT_02749___    351 LVRKIKTAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIY    400
                     ||.|||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_016850__    351 LVGKIKAAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIY    400

BSNT_02749___    401 SPREGTPAAKMKDNVPMRVKKERLQRLNALVNEISAKKMKEYEGKVVEVL    450
                     ||||||||||||||||||||||||||||.||.||||||||||||:.||||
RBAM_016850__    401 SPREGTPAAKMKDNVPMRVKKERLQRLNDLVKEISAKKMKEYEGRTVEVL    450

BSNT_02749___    451 VEGESKNNPDILAGYTEKSKLVNFKGPKEAIGKIVRVKIQQAKTWSLDGE    500
                     ||||||||||||||||||||||||||||:||||||||||:|||||||||.
RBAM_016850__    451 VEGESKNNPDILAGYTEKSKLVNFKGPKDAIGKIVRVKIEQAKTWSLDGV    500

BSNT_02749___    501 MVGEAIEVK    509
                     |.|||||||
RBAM_016850__    501 MAGEAIEVK    509


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.