Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02744 and RBAM_016810

See DNA alignment / Visit BSNT_02744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_02744___ymdB.1.9828.seq
#    -bsequence pep-align/RBAM_016810___ymdB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02744___ymdB-RBAM_016810___ymdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02744___ymdB-RBAM_016810___ymdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02744___ymdB
# 2: RBAM_016810___ymdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     246/264 (93.2%)
# Similarity:   258/264 (97.7%)
# Gaps:           0/264 ( 0.0%)
# Score: 1318.0
# 
#
#=======================================

BSNT_02744___      1 MRILFIGDVVGSPGRDMVKEYVPKLKTKYKPHFTIINGENAAHGKGLTEK     50
                     ||||||||||||||||||||||||||.|:|||||||||||||||||||||
RBAM_016810__      1 MRILFIGDVVGSPGRDMVKEYVPKLKAKHKPHFTIINGENAAHGKGLTEK     50

BSNT_02744___     51 IYHRLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGTPGKGI    100
                     |||.|:::||||||||||||||:||||||||||:||||||||||||||||
RBAM_016810__     51 IYHSLMEAGADAITMGNHTWDKREIFDFIDDVPHLVRPANFPEGTPGKGI    100

BSNT_02744___    101 TYVKANGKELAVINLQGRTFLPPLDDPFLKADELIAEAAKRTPYIFIDFH    150
                     ||:|:|||||||||||||||||||||||.||||||.||.|||||||||||
RBAM_016810__    101 TYIKSNGKELAVINLQGRTFLPPLDDPFAKADELIEEAKKRTPYIFIDFH    150

BSNT_02744___    151 AEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTG    200
                     |||||||:|:||||||||||||||||||||||||||||||||||||||||
RBAM_016810__    151 AEATSEKIAIGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTG    200

BSNT_02744___    201 PYDGILGMDRETIIKRFKTNLPVRFTVAEGKTTLSGVVIDIDDQTKKAVK    250
                     ||||||||||||:||||||||||||||||||||||||:|||||||||||.
RBAM_016810__    201 PYDGILGMDRETVIKRFKTNLPVRFTVAEGKTTLSGVLIDIDDQTKKAVN    250

BSNT_02744___    251 IERILINDDHMFFE    264
                     ||||||||||||||
RBAM_016810__    251 IERILINDDHMFFE    264


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