Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02727 and RBAM_016650

See DNA alignment / Visit BSNT_02727 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence pep-align/BSNT_02727___spoIIIE.1.9828.seq
#    -bsequence pep-align/RBAM_016650___ftsK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02727___spoIIIE-RBAM_016650___ftsK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02727___spoIIIE-RBAM_016650___ftsK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02727___spoIIIE
# 2: RBAM_016650___ftsK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 791
# Identity:     685/791 (86.6%)
# Similarity:   738/791 (93.3%)
# Gaps:           9/791 ( 1.1%)
# Score: 3443.5
# 
#
#=======================================

BSNT_02727___      1 MAKKKRKSRKKQAKQLNIKYELNGLLCIAISIIAILQLGVVGQTFIYLFR     50
                     ||||||||:|||..:||:||||:||||:||||||:||||||||||:||||
RBAM_016650__      1 MAKKKRKSKKKQESKLNLKYELSGLLCVAISIIAVLQLGVVGQTFVYLFR     50

BSNT_02727___     51 FFAGEWFILCLLGLLVLGVSLFWKKKTPSLLTRRKAGLYCIIASILLLSH    100
                     |||||||||||:.|.:||:|||||||:|||||||||||||||||||||||
RBAM_016650__     51 FFAGEWFILCLIALFLLGISLFWKKKSPSLLTRRKAGLYCIIASILLLSH    100

BSNT_02727___    101 VQLFKNLTHKGSIESASVVRNTWELFLMDMNGSSASPDLGGGMIGALLFA    150
                     |||||||:|.|||.||||:.||||||::||...:||||||||||||:|||
RBAM_016650__    101 VQLFKNLSHHGSIRSASVIGNTWELFMIDMKQQAASPDLGGGMIGAVLFA    150

BSNT_02727___    151 TSHFLFASTGSQIMAIVMILIGMILVTGRSLQETLKKWMSPIGRFIKEQW    200
                     .||||||||||||||||:||:|:|||||||||||||||.||:||||:.||
RBAM_016650__    151 ASHFLFASTGSQIMAIVLILMGLILVTGRSLQETLKKWTSPVGRFIRGQW    200

BSNT_02727___    201 LAFIDDMKSFKSNIQSSKKTKAPS-KKQKPARKKQQMEPEPPDEEGDYET    249
                     .||::|||:.::|: ||.|||..| ||||..:||:: ||||  ||.|.|.
RBAM_016650__    201 QAFLEDMKTVRTNM-SSPKTKTKSGKKQKRVQKKKE-EPEP--EEEDEEI    246

BSNT_02727___    250 VSPLIHSEPIISSFSDRNEEEESPVIEKRAEPVSKPLQDIQPETGDQ---    296
                     :||:|||||||||||||.||...|:|.::.:..::..:| :|..|.|   
RBAM_016650__    247 ISPIIHSEPIISSFSDRQEEPAEPLIPEKTQETAQAPKD-EPSGGAQDSG    295

BSNT_02727___    297 ETVSAPPMTFTELENKDYEMPSLDLLADPKHTGQQADKKNIYENARKLER    346
                     ||.:||||||||||||||:|||||:||||||||||.||||||||||||||
RBAM_016650__    296 ETAAAPPMTFTELENKDYQMPSLDILADPKHTGQQTDKKNIYENARKLER    345

BSNT_02727___    347 TFQSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLSDDLALALAAK    396
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016650__    346 TFQSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLSDDLALALAAK    395

BSNT_02727___    397 DIRIEAPIPGKSAIGIEVPNAEVAMVSLKEVLESKLNDRPDAKLLIGLGR    446
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
RBAM_016650__    396 DIRIEAPIPGKSAIGIEVPNAEVAMVSLKEVLESKLNDKPDAKLLIGLGR    445

BSNT_02727___    447 NISGEAVLAELNKMPHLLVAGATGSGKSVCVNGIITSILMRAKPHEVKMM    496
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016650__    446 NISGEAVLAELNKMPHLLVAGATGSGKSVCVNGIITSILMRAKPHEVKMM    495

BSNT_02727___    497 MIDPKMVELNVYNGIPHLLAPVVTDPKKASQALKKVVNEMERRYELFSHT    546
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016650__    496 MIDPKMVELNVYNGIPHLLAPVVTDPKKASQALKKVVNEMERRYELFSHT    545

BSNT_02727___    547 GTRNIEGYNDYINRANNEEGAKQPELPYIVVIVDELADLMMVASSDVEDS    596
                     ||||||||||:|.|:|.||..|||||||||||||||||||||||||||||
RBAM_016650__    546 GTRNIEGYNDHIKRSNAEEEVKQPELPYIVVIVDELADLMMVASSDVEDS    595

BSNT_02727___    597 ITRLSQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFSVSSQTDSR    646
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016650__    596 ITRLSQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFSVSSQTDSR    645

BSNT_02727___    647 TILDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDDEVEKVVDHVITQ    696
                     |||||||||||||||||||||||||||||||||||||:|||.||||||||
RBAM_016650__    646 TILDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDEEVEHVVDHVITQ    695

BSNT_02727___    697 QKAQYQEEMIPEETTETHSEVTDELYDEAVELIVGMQTASVSMLQRRFRI    746
                     |||||||||||||.:||||||||:||||||:||:||||||||||||||||
RBAM_016650__    696 QKAQYQEEMIPEEVSETHSEVTDDLYDEAVDLIIGMQTASVSMLQRRFRI    745

BSNT_02727___    747 GYTRAARLIDAMEERGVVGPYEGSKPREVLLSKEKYDELSS    787
                     ||||||||||||||||||||||||||||||||||:||||||
RBAM_016650__    746 GYTRAARLIDAMEERGVVGPYEGSKPREVLLSKEQYDELSS    786


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