Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02712 and RBAM_016560

See DNA alignment / Visit BSNT_02712 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02712___ymxH.1.9828.seq
#    -bsequence pep-align/RBAM_016560___ymxH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02712___ymxH-RBAM_016560___ymxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02712___ymxH-RBAM_016560___ymxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02712___ymxH
# 2: RBAM_016560___ymxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 85
# Identity:      79/85 (92.9%)
# Similarity:    82/85 (96.5%)
# Gaps:           0/85 ( 0.0%)
# Score: 406.0
# 
#
#=======================================

BSNT_02712___      1 MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016560__      1 MRLSELSGKEIVDIKRAERLGVLGQTDLEINEQDGQITALLIPTVKWFGL     50

BSNT_02712___     51 RKQGHDIRVPWHHIQKIGSDMIILDVPEEMPPRQE     85
                     |||||||||||:|||||||||||||||.|:.|.:|
RBAM_016560__     51 RKQGHDIRVPWNHIQKIGSDMIILDVPGEITPPEE     85


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