Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02710 and RBAM_016540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence pep-align/BSNT_02710___ylxY.1.9828.seq
# -bsequence pep-align/RBAM_016540___ylxY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02710___ylxY-RBAM_016540___ylxY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02710___ylxY-RBAM_016540___ylxY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02710___ylxY
# 2: RBAM_016540___ylxY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 260/319 (81.5%)
# Similarity: 296/319 (92.8%)
# Gaps: 0/319 ( 0.0%)
# Score: 1426.0
#
#
#=======================================
BSNT_02710___ 1 MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDQLYE 50
|.|||||||||||||||||||::||:.:|||.|||||.|||:||||.|||
RBAM_016540__ 1 MLKKFVPFAVFLFLFFVSFEMLKNPYTVDYIDAMKKDAVTVSASKDPLYE 50
BSNT_02710___ 51 ELLQKAPEYEVKPQNARIDKVWKSIPGYNGLKVNIEQSYKKMKKHGEFRE 100
||||||.|||||||:|||||:|||||||||||||:|:|||:|||.|||.|
RBAM_016540__ 51 ELLQKASEYEVKPQDARIDKIWKSIPGYNGLKVNVEKSYKQMKKDGEFHE 100
BSNT_02710___ 101 KDLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLP 150
..|||.||||.|||:||.||||||||||||||||||||||||||:|:|||
RBAM_016540__ 101 DGLVYEQVKPKVHLDSLAPEPIYKGNPDKPMVAFLINVAWGNEYVEQMLP 150
BSNT_02710___ 151 ILQKHQVKATFFLEGNWVRNNEKLAKKIAKDGHEIGNHSYNHPDMSKLTT 200
||::|||||||||||.|::||::|.||||.|||||||||||||||||||:
RBAM_016540__ 151 ILKQHQVKATFFLEGKWLKNNQELGKKIAADGHEIGNHSYNHPDMSKLTS 200
BSNT_02710___ 201 GRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIAAEKQMGTVMW 250
|.|||||||||.||.:|:|:||||||||||||||||:|:||||.|||:||
RBAM_016540__ 201 GSISEQLDKTNAQISETLGIKPKWFAPPSGSFRKAVVDLAAEKGMGTIMW 250
BSNT_02710___ 251 TVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKD 300
||||||||||:|:|||||||||||||||||||||||||:||:.||.:||:
RBAM_016540__ 251 TVDTIDWQKPSPAVLQTRVLSKIHNGAMILMHPTDPTAKSLDTLIAKIKE 300
BSNT_02710___ 301 KGYALGTVTELMDETRLLK 319
||||||:|::||||.||:|
RBAM_016540__ 301 KGYALGSVSDLMDENRLMK 319
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