Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02698 and RBAM_016430

See DNA alignment / Visit BSNT_02698 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_02698___ylxS.1.9828.seq
#    -bsequence pep-align/RBAM_016430___ylxS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02698___ylxS-RBAM_016430___ylxS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02698___ylxS-RBAM_016430___ylxS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02698___ylxS
# 2: RBAM_016430___ylxS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     143/156 (91.7%)
# Similarity:   155/156 (99.4%)
# Gaps:           0/156 ( 0.0%)
# Score: 745.0
# 
#
#=======================================

BSNT_02698___      1 MSKKVTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDGVDI     50
                     ||||||||||||||||:|.|||||||||||||||:|||||||||::||||
RBAM_016430__      1 MSKKVTDTVQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDSENGVDI     50

BSNT_02698___     51 EECAKVSEALSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKN    100
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_016430__     51 EECAKVSEALSEKLDEADPITQNYFLEVSSPGAERPLKKKADFEKSLGKN    100

BSNT_02698___    101 VYIKTYEPIDGVKVFEGELAEFDGQTVTVEITIKTRKKRINIPYEKIANA    150
                     ||:||||||||:|||||:||||||||||:|:|:||||||:||||||||||
RBAM_016430__    101 VYMKTYEPIDGLKVFEGKLAEFDGQTVTIEMTVKTRKKRVNIPYEKIANA    150

BSNT_02698___    151 RLAVTF    156
                     ||||||
RBAM_016430__    151 RLAVTF    156


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