Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02697 and RBAM_016420

See DNA alignment / Visit BSNT_02697 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence pep-align/BSNT_02697___polC.1.9828.seq
#    -bsequence pep-align/RBAM_016420___polC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02697___polC-RBAM_016420___polC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02697___polC-RBAM_016420___polC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02697___polC
# 2: RBAM_016420___polC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1437
# Identity:    1341/1437 (93.3%)
# Similarity:  1400/1437 (97.4%)
# Gaps:           0/1437 ( 0.0%)
# Score: 7060.0
# 
#
#=======================================

BSNT_02697___      1 MEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKASKSWHFHF     50
                     |||||||||||||||||:||||||||||||.|||.|||||||.|:|||.|
RBAM_016420__      1 MEQLSVNRRQFQILLQQLNMTDDTFMTYFEDGEIDKLTIHKAEKAWHFQF     50

BSNT_02697___     51 QFKSLLPFQIYDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSR    100
                     :||:|||:||||:...||||||||||:||||::|.|..|:|.:|||||:|
RBAM_016420__     51 RFKALLPYQIYDSFMMRLTQSFAHIARVTSSVQVIDPTVTEELVQDYWTR    100

BSNT_02697___    101 CIEELQGISPPIISLLNQQKPKLKGNKLIVKTKTDTEAAALKNKYSSMIQ    150
                     |||||:|.|||:::||||||||||||||||||||||||:|||||||::||
RBAM_016420__    101 CIEELEGTSPPMVALLNQQKPKLKGNKLIVKTKTDTEASALKNKYSALIQ    150

BSNT_02697___    151 AGYRQFGFPDLQLDAEIFVSEQEVQKFREQKLAEDQERAMQALIEMEKKD    200
                     ..|||||||:||||.|||||:||||||||||||||||||||||||||||:
RBAM_016420__    151 HSYRQFGFPELQLDTEIFVSDQEVQKFREQKLAEDQERAMQALIEMEKKE    200

BSNT_02697___    201 KESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITVQGYVFDVETR    250
                     ||.|||||||||||||||||:|||||||||||||||||||||:|||.|||
RBAM_016420__    201 KEGDEDQAPSGPLVIGYQIKENEEIRTLDSIMDEERRITVQGFVFDAETR    250

BSNT_02697___    251 ELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI    300
                     |||||||||||||||||||||:||||||||||||||:|||||||||||||
RBAM_016420__    251 ELKSGRTLCIFKITDYTNSILVKMFAREKEDAALMKTLKKGMWVKARGSI    300

BSNT_02697___    301 QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVT    350
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_016420__    301 QNDTFVRDLVMIANDVNEIKAKTREDTAPEGEKRVELHLHSPMSQMDAVT    350

BSNT_02697___    351 GIGKLVEQAKKWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANL    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_016420__    351 GIGKLVEQAKKWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANI    400

BSNT_02697___    401 VDDGVPIAYNAAHRLLEEETYVVFDVETTGLSAVYDTIIELAAVKVKGGE    450
                     ||||||||||.|||||||:||||||||||||||||||||||||||::|||
RBAM_016420__    401 VDDGVPIAYNPAHRLLEEDTYVVFDVETTGLSAVYDTIIELAAVKIRGGE    450

BSNT_02697___    451 IIDKFEAFANPHRPLSATIIELTGITDDMLQDAPDVVDVIRDFREWIGDD    500
                     ||||||||||||.|||||.||||||||||::||||||||:|||:||||||
RBAM_016420__    451 IIDKFEAFANPHHPLSATTIELTGITDDMVRDAPDVVDVVRDFKEWIGDD    500

BSNT_02697___    501 ILVAHNASFDMGFLNVAYKKLLEVDKAKNPVIDTLELGRFLYPEFKNHRL    550
                     :||||||||||||||||||:||:.:||||||||||||.||||||||||||
RBAM_016420__    501 VLVAHNASFDMGFLNVAYKRLLKTEKAKNPVIDTLELARFLYPEFKNHRL    550

BSNT_02697___    551 NTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM    600
                     |||||||||||||||||::|.|||.|||||||||||||.|.|||:|||||
RBAM_016420__    551 NTLCKKFDIELTQHHRAVFDAEATGYLLLKMLKDAAEKDIFYHDQLNENM    600

BSNT_02697___    601 GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQL    650
                     ||||||||||||||||||||.|||||||||||:|||.|||||||||||||
RBAM_016420__    601 GQSNAYQRSRPYHATLLAVNETGLKNLFKLVSISHIQYFYRVPRIPRSQL    650

BSNT_02697___    651 EKYREGLLIGSACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRH    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016420__    651 NKYREGLLIGSACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRH    700

BSNT_02697___    701 LLELELVRDEKALKEIIANITKLGEKLNKPVVATGNVHYLNDEDKIYRKI    750
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016420__    701 LLQLELVRDEKALKEIIANITKLGEKLNKPVVATGNVHYLNDEDKIYRKI    750

BSNT_02697___    751 LISSQGGANPLNRHELPKVHFRTTDEMLEAFSFLGEEKAKEIVVTNTQKV    800
                     |||||||||||||||||||||||||||||||||||.||||||||.|||||
RBAM_016420__    751 LISSQGGANPLNRHELPKVHFRTTDEMLEAFSFLGAEKAKEIVVDNTQKV    800

BSNT_02697___    801 ASLVDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGEELPEIVEARI    850
                     ||::|:|||||||||||||:||||||||||||||||||||||||||||||
RBAM_016420__    801 ASMIDEIKPIKDDLYTPKIDGADEEIREMSYQRARSIYGEELPEIVEARI    850

BSNT_02697___    851 EKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016420__    851 EKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI    900

BSNT_02697___    901 TEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKEGHD    950
                     ||||||.||||||.|::||||||||||||||||||:||.|||||||:|||
RBAM_016420__    901 TEVNPLAPHYVCPSCRYSEFFNDGSVGSGFDLPDKSCPSCGTPLKKDGHD    950

BSNT_02697___    951 IPFETFLGFKGDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGT   1000
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_016420__    951 IPFETFLGFKGDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGT   1000

BSNT_02697___   1001 VAEKTAYGYVKGYAGDNNLHMRGAEIDRLVQGCTGVKRTTGQHPGGIIVV   1050
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_016420__   1001 VAEKTAYGYVKGYAGDHNLHMRGAEIDRLVQGCTGVKRTTGQHPGGIIVV   1050

BSNT_02697___   1051 PDYMDIYDFSPIQFPADATGSEWKTTHFDFHSIHDNLLKLDILGHDDPTV   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016420__   1051 PDYMDIYDFSPIQFPADATGSEWKTTHFDFHSIHDNLLKLDILGHDDPTV   1100

BSNT_02697___   1101 IRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIGCKTGTLGIPE   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016420__   1101 IRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIGCKTGTLGIPE   1150

BSNT_02697___   1151 FGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS   1200
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_016420__   1151 FGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNTCELS   1200

BSNT_02697___   1201 EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVP   1250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_016420__   1201 EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKKNNVP   1250

BSNT_02697___   1251 DWYIDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRAD   1300
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016420__   1251 NWYIDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRAD   1300

BSNT_02697___   1301 DFDIDTMIKGSTAIRAVMEDINAKGLDASPKEKNLLTVLELALEMCERGY   1350
                     ||||||||||||||||||:||::|||||||||||||||||||||||||||
RBAM_016420__   1301 DFDIDTMIKGSTAIRAVMDDISSKGLDASPKEKNLLTVLELALEMCERGY   1350

BSNT_02697___   1351 SFQKVDLYRSSATEFIIDGNSLIPPFNSIPGLGTNAALNIVKAREEGEFL   1400
                     ||||||||||||:|||||||||||||||||||||||||||||||:|||||
RBAM_016420__   1351 SFQKVDLYRSSASEFIIDGNSLIPPFNSIPGLGTNAALNIVKARKEGEFL   1400

BSNT_02697___   1401 SKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF   1437
                     |||||||||||||||||||||||||||||||||||||
RBAM_016420__   1401 SKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF   1437


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