Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02685 and RBAM_016330

See DNA alignment / Visit BSNT_02685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_02685___rpsB.1.9828.seq
#    -bsequence pep-align/RBAM_016330___rpsB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02685___rpsB-RBAM_016330___rpsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02685___rpsB-RBAM_016330___rpsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02685___rpsB
# 2: RBAM_016330___rpsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     243/246 (98.8%)
# Similarity:   244/246 (99.2%)
# Gaps:           0/246 ( 0.0%)
# Score: 1229.0
# 
#
#=======================================

BSNT_02685___      1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016330__      1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKV     50

BSNT_02685___     51 EEAYNFTKNLAAEGGKILFVGTKKQAQDSVKEEAQRSGMYYVNQRWLGGT    100
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_016330__     51 EEAYNFTKNLAAEGGKILFVGTKKQAQDSVKEEAVRSGMYYVNQRWLGGT    100

BSNT_02685___    101 LTNFETIQKRIKRLKDIEKMQENGTFDVLPKKEVVQLKKELERLEKFLGG    150
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_016330__    101 LTNFETIQKRIKRLKDIEKMQENGTFEVLPKKEVVQLKKELERLEKFLGG    150

BSNT_02685___    151 IKDMKDLPDALFIIDPRKERIAVAEARKLNIPIIGIVDTNCDPDEIDVVI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016330__    151 IKDMKDLPDALFIIDPRKERIAVAEARKLNIPIIGIVDTNCDPDEIDVVI    200

BSNT_02685___    201 PANDDAIRAVKLLTSKMADAILEAKQGEEEAEVAEETAPETETTTA    246
                     ||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_016330__    201 PANDDAIRAVKLLTSKMADAILEAKQGEEEAEAAEETAPETETTTA    246


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