Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02678 and RBAM_016280

See DNA alignment / Visit BSNT_02678 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_02678___cheW.1.9828.seq
#    -bsequence pep-align/RBAM_016280___cheW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02678___cheW-RBAM_016280___cheW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02678___cheW-RBAM_016280___cheW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02678___cheW
# 2: RBAM_016280___cheW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     125/157 (79.6%)
# Similarity:   141/157 (89.8%)
# Gaps:           1/157 ( 0.6%)
# Score: 631.0
# 
#
#=======================================

BSNT_02678___      1 MTAEIKTGEKMIVFMVNGKEYAISVTQVKSIEKWQKPTRVPGVEPYICGV     50
                     |||||||||||||||:|||||||||:||||||||||||||||||.||.||
RBAM_016280__      1 MTAEIKTGEKMIVFMINGKEYAISVSQVKSIEKWQKPTRVPGVESYIRGV     50

BSNT_02678___     51 INLRGVVTPVIDLRKRLNLPEYEITDETRIIIIAYRDIEVGWIVDEANDV    100
                     ||||||:|||:|||||||.||.:||:|||||||:|||.:|||:|||||||
RBAM_016280__     51 INLRGVITPVLDLRKRLNQPEQDITEETRIIIISYRDADVGWVVDEANDV    100

BSNT_02678___    101 ITVHESEIESAPEGVQKDTDVSIEQIVKQENRLLNIIDANAVLDKESSQS    150
                     |||||:|||||||...|:|||.|:|||||:|||||||||:|||||.:|.|
RBAM_016280__    101 ITVHENEIESAPESQTKETDVWIKQIVKQDNRLLNIIDAHAVLDKGASAS    150

BSNT_02678___    151 AVPDQA-    156
                     |..:.. 
RBAM_016280__    151 ASGEPNA    157


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