Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02664 and RBAM_016170

See DNA alignment / Visit BSNT_02664 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence pep-align/BSNT_02664___cheY.1.9828.seq
#    -bsequence pep-align/RBAM_016170___cheY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02664___cheY-RBAM_016170___cheY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02664___cheY-RBAM_016170___cheY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02664___cheY
# 2: RBAM_016170___cheY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     114/120 (95.0%)
# Similarity:   118/120 (98.3%)
# Gaps:           0/120 ( 0.0%)
# Score: 566.0
# 
#
#=======================================

BSNT_02664___      1 MAHRILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKEHSPDL     50
                     |||||||||||||||||||||||||||:|||||.:|||||||:|||||||
RBAM_016170__      1 MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDL     50

BSNT_02664___     51 VTMDITMPEMDGITALKEIKQIDAQARIIMCSAMGQQSMVIDAIQAGAKD    100
                     |||||||||||||||||||||||.||:|||||||||||||||||||||||
RBAM_016170__     51 VTMDITMPEMDGITALKEIKQIDPQAKIIMCSAMGQQSMVIDAIQAGAKD    100

BSNT_02664___    101 FIVKPFQADRVLEAINKTLS    120
                     ||||||||||||||||||||
RBAM_016170__    101 FIVKPFQADRVLEAINKTLS    120


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.